Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RPS29P25-201ENST00000481709 171 ntBASIC2.55□□□□□ -2
NPHP1O15259 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.55□□□□□ -2
NPHP1O15259 AC096745.1-201ENST00000509945 370 ntBASIC2.55□□□□□ -2
NPHP1O15259 AC005741.1-201ENST00000511094 432 ntBASIC2.55□□□□□ -2
NPHP1O15259 RNA5SP490-201ENST00000517141 136 ntBASIC2.55□□□□□ -2
NPHP1O15259 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.55□□□□□ -2
NPHP1O15259 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.55□□□□□ -2
NPHP1O15259 AL133215.3-201ENST00000609801 448 ntBASIC2.55□□□□□ -2
NPHP1O15259 MIR8076-201ENST00000611401 83 ntBASIC2.55□□□□□ -2
NPHP1O15259 AL138726.1-201ENST00000614873 333 ntBASIC2.55□□□□□ -2
NPHP1O15259 AL162373.1-201ENST00000620433 407 ntBASIC2.55□□□□□ -2
NPHP1O15259 AC090617.10-201ENST00000624308 134 ntBASIC2.55□□□□□ -2
NPHP1O15259 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPHP1O15259 Y_RNA.4-201ENST00000362333 112 ntBASIC2.54□□□□□ -2
NPHP1O15259 RNU5B-2P-201ENST00000363036 113 ntBASIC2.54□□□□□ -2
NPHP1O15259 RNU6-877P-201ENST00000383868 107 ntBASIC2.54□□□□□ -2
NPHP1O15259 Y_RNA.414-201ENST00000384011 101 ntBASIC2.54□□□□□ -2
NPHP1O15259 RNA5SP465-201ENST00000391195 109 ntBASIC2.54□□□□□ -2
NPHP1O15259 MIR548F1-201ENST00000408667 84 ntBASIC2.54□□□□□ -2
NPHP1O15259 RNU2-2P-201ENST00000410396 191 ntBASIC2.54□□□□□ -2
NPHP1O15259 RNU2-41P-201ENST00000410991 178 ntBASIC2.54□□□□□ -2
NPHP1O15259 ZNF885P-201ENST00000420174 1098 ntBASIC2.54□□□□□ -2
NPHP1O15259 MTCYBP18-201ENST00000501056 747 ntBASIC2.54□□□□□ -2
NPHP1O15259 ATP5EP1-201ENST00000510257 156 ntBASIC2.54□□□□□ -2
NPHP1O15259 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.54□□□□□ -2
NPHP1O15259 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.54□□□□□ -2
NPHP1O15259 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.54□□□□□ -2
NPHP1O15259 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.54□□□□□ -2
NPHP1O15259 AC110588.1-201ENST00000559699 137 ntBASIC2.54□□□□□ -2
NPHP1O15259 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.54□□□□□ -2
NPHP1O15259 AC146944.4-201ENST00000602697 718 ntBASIC2.54□□□□□ -2
NPHP1O15259 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPHP1O15259 U2.15-201ENST00000611544 191 ntBASIC2.54□□□□□ -2
NPHP1O15259 U2.16-201ENST00000613119 191 ntBASIC2.54□□□□□ -2
NPHP1O15259 U2.12-201ENST00000613778 191 ntBASIC2.54□□□□□ -2
NPHP1O15259 U2.20-201ENST00000613956 192 ntBASIC2.54□□□□□ -2
NPHP1O15259 U2.9-201ENST00000615427 191 ntBASIC2.54□□□□□ -2
NPHP1O15259 U2.11-201ENST00000616345 191 ntBASIC2.54□□□□□ -2
NPHP1O15259 U2.2-201ENST00000616535 191 ntBASIC2.54□□□□□ -2
NPHP1O15259 U2.3-201ENST00000617785 191 ntBASIC2.54□□□□□ -2
NPHP1O15259 U2.19-201ENST00000618602 191 ntBASIC2.54□□□□□ -2
NPHP1O15259 RNU2-1-201ENST00000618664 191 ntBASIC2.54□□□□□ -2
NPHP1O15259 U2.6-201ENST00000619225 191 ntBASIC2.54□□□□□ -2
NPHP1O15259 U2.5-201ENST00000619465 191 ntBASIC2.54□□□□□ -2
NPHP1O15259 U2.10-201ENST00000620268 191 ntBASIC2.54□□□□□ -2
NPHP1O15259 ZNF702P-202ENST00000434269 1966 ntBASIC2.54□□□□□ -2
NPHP1O15259 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
NPHP1O15259 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
NPHP1O15259 Y_RNA.6-201ENST00000362350 114 ntBASIC2.53□□□□□ -2
NPHP1O15259 RNA5SP276-201ENST00000362580 94 ntBASIC2.53□□□□□ -2
NPHP1O15259 Y_RNA.295-201ENST00000364918 102 ntBASIC2.53□□□□□ -2
NPHP1O15259 Y_RNA.332-201ENST00000365271 113 ntBASIC2.53□□□□□ -2
NPHP1O15259 RNU6-1286P-201ENST00000383871 107 ntBASIC2.53□□□□□ -2
NPHP1O15259 RNU6-933P-201ENST00000384424 107 ntBASIC2.53□□□□□ -2
NPHP1O15259 Y_RNA.573-201ENST00000384763 105 ntBASIC2.53□□□□□ -2
NPHP1O15259 SNORD115-47-201ENST00000391226 86 ntBASIC2.53□□□□□ -2
NPHP1O15259 AL512604.1-201ENST00000404812 257 ntBASIC2.53□□□□□ -2
NPHP1O15259 AL139156.1-201ENST00000412785 841 ntBASIC2.53□□□□□ -2
NPHP1O15259 AC027124.2-201ENST00000428249 105 ntBASIC2.53□□□□□ -2
NPHP1O15259 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.53□□□□□ -2
NPHP1O15259 RPL23AP3-201ENST00000453844 468 ntBASIC2.53□□□□□ -2
NPHP1O15259 snoU13.6-201ENST00000458785 104 ntBASIC2.53□□□□□ -2
NPHP1O15259 AC104435.1-201ENST00000483483 166 ntBASIC2.53□□□□□ -2
NPHP1O15259 RPS27P21-201ENST00000486977 252 ntBASIC2.53□□□□□ -2
NPHP1O15259 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.53□□□□□ -2
NPHP1O15259 RNU6-256P-201ENST00000516747 97 ntBASIC2.53□□□□□ -2
NPHP1O15259 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.53□□□□□ -2
NPHP1O15259 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.53□□□□□ -2
NPHP1O15259 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.53□□□□□ -2
NPHP1O15259 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.53□□□□□ -2
NPHP1O15259 MIR4287-201ENST00000579398 78 ntBASIC2.53□□□□□ -2
NPHP1O15259 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.53□□□□□ -2
NPHP1O15259 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
NPHP1O15259 AC008555.8-201ENST00000623602 2168 ntBASIC2.52□□□□□ -2.01
NPHP1O15259 RNU1-58P-201ENST00000362413 163 ntBASIC2.52□□□□□ -2.01
NPHP1O15259 Y_RNA.135-201ENST00000363439 95 ntBASIC2.52□□□□□ -2.01
NPHP1O15259 MIR521-1-201ENST00000384902 87 ntBASIC2.52□□□□□ -2.01
NPHP1O15259 RNA5SP118-201ENST00000410385 109 ntBASIC2.52□□□□□ -2.01
NPHP1O15259 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.52□□□□□ -2.01
NPHP1O15259 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.52□□□□□ -2.01
NPHP1O15259 AL590632.1-201ENST00000424289 371 ntBASIC2.52□□□□□ -2.01
NPHP1O15259 AL513185.2-201ENST00000425543 193 ntBASIC2.52□□□□□ -2.01
NPHP1O15259 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.52□□□□□ -2.01
NPHP1O15259 MTND2P29-201ENST00000438595 412 ntBASIC2.52□□□□□ -2.01
NPHP1O15259 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.52□□□□□ -2.01
NPHP1O15259 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NPHP1O15259 MTND1P11-201ENST00000456661 876 ntBASIC2.52□□□□□ -2.01
NPHP1O15259 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.52□□□□□ -2.01
NPHP1O15259 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.52□□□□□ -2.01
NPHP1O15259 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NPHP1O15259 MRPS36P4-201ENST00000534436 298 ntBASIC2.52□□□□□ -2.01
NPHP1O15259 FGF7P1-201ENST00000582820 288 ntBASIC2.52□□□□□ -2.01
NPHP1O15259 MIR3672-201ENST00000584290 82 ntBASIC2.52□□□□□ -2.01
NPHP1O15259 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.52□□□□□ -2.01
NPHP1O15259 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.52□□□□□ -2.01
NPHP1O15259 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.51□□□□□ -2.01
NPHP1O15259 RNU6-968P-201ENST00000384076 107 ntBASIC2.51□□□□□ -2.01
NPHP1O15259 Y_RNA.453-201ENST00000384223 109 ntBASIC2.51□□□□□ -2.01
NPHP1O15259 RNU6-784P-201ENST00000384330 106 ntBASIC2.51□□□□□ -2.01
NPHP1O15259 SNORA51.11-201ENST00000384442 131 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms