Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC090517.1-201ENST00000569307 266 ntBASIC1.21□□□□□ -2.22
LSM1O15116 SNORA59B-202ENST00000578183 701 ntBASIC1.21□□□□□ -2.22
LSM1O15116 AL355802.3-201ENST00000607571 545 ntBASIC1.21□□□□□ -2.22
LSM1O15116 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
LSM1O15116 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.21□□□□□ -2.22
LSM1O15116 MTND5P35-201ENST00000557537 1720 ntBASIC1.2□□□□□ -2.22
LSM1O15116 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
LSM1O15116 RNU6-457P-201ENST00000363999 107 ntBASIC1.2□□□□□ -2.22
LSM1O15116 MTND2P18-201ENST00000419962 1030 ntBASIC1.2□□□□□ -2.22
LSM1O15116 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.2□□□□□ -2.22
LSM1O15116 AL031667.1-201ENST00000440222 725 ntBASIC1.2□□□□□ -2.22
LSM1O15116 MTCO2P3-201ENST00000442543 421 ntBASIC1.2□□□□□ -2.22
LSM1O15116 AL356010.1-201ENST00000456364 102 ntBASIC1.2□□□□□ -2.22
LSM1O15116 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.2□□□□□ -2.22
LSM1O15116 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.2□□□□□ -2.22
LSM1O15116 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.2□□□□□ -2.22
LSM1O15116 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.2□□□□□ -2.22
LSM1O15116 AC105417.1-201ENST00000514691 285 ntBASIC1.2□□□□□ -2.22
LSM1O15116 RNU1-92P-201ENST00000517017 135 ntBASIC1.2□□□□□ -2.22
LSM1O15116 AC069113.1-201ENST00000517763 267 ntBASIC1.2□□□□□ -2.22
LSM1O15116 AC008147.4-201ENST00000617570 1204 ntBASIC1.2□□□□□ -2.22
LSM1O15116 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.2□□□□□ -2.22
LSM1O15116 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LSM1O15116 U8.10-201ENST00000384260 133 ntBASIC1.19□□□□□ -2.22
LSM1O15116 RNU6-456P-201ENST00000384493 107 ntBASIC1.19□□□□□ -2.22
LSM1O15116 RNU6-903P-201ENST00000391270 109 ntBASIC1.19□□□□□ -2.22
LSM1O15116 MIR208B-201ENST00000401172 77 ntBASIC1.19□□□□□ -2.22
LSM1O15116 MRPL35P1-201ENST00000404272 572 ntBASIC1.19□□□□□ -2.22
LSM1O15116 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.19□□□□□ -2.22
LSM1O15116 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.19□□□□□ -2.22
LSM1O15116 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.19□□□□□ -2.22
LSM1O15116 CST2P1-201ENST00000425770 87 ntBASIC1.19□□□□□ -2.22
LSM1O15116 USP9YP28-201ENST00000435142 589 ntBASIC1.19□□□□□ -2.22
LSM1O15116 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.19□□□□□ -2.22
LSM1O15116 AC132479.1-201ENST00000449160 144 ntBASIC1.19□□□□□ -2.22
LSM1O15116 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
LSM1O15116 RNU6-1041P-201ENST00000516254 102 ntBASIC1.19□□□□□ -2.22
LSM1O15116 RNA5SP384-201ENST00000516615 116 ntBASIC1.19□□□□□ -2.22
LSM1O15116 AC016256.1-201ENST00000547971 354 ntBASIC1.19□□□□□ -2.22
LSM1O15116 AC025449.1-201ENST00000603896 529 ntBASIC1.19□□□□□ -2.22
LSM1O15116 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.19□□□□□ -2.22
LSM1O15116 RNU6-482P-201ENST00000391068 107 ntBASIC1.18□□□□□ -2.22
LSM1O15116 SNORA17.3-201ENST00000391159 129 ntBASIC1.18□□□□□ -2.22
LSM1O15116 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.18□□□□□ -2.22
LSM1O15116 RNU2-7P-201ENST00000410794 178 ntBASIC1.18□□□□□ -2.22
LSM1O15116 BX295541.1-201ENST00000417774 250 ntBASIC1.18□□□□□ -2.22
LSM1O15116 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.18□□□□□ -2.22
LSM1O15116 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.18□□□□□ -2.22
LSM1O15116 MTCO3P29-201ENST00000432119 779 ntBASIC1.18□□□□□ -2.22
LSM1O15116 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.18□□□□□ -2.22
LSM1O15116 AC069257.2-201ENST00000441819 155 ntBASIC1.18□□□□□ -2.22
LSM1O15116 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.18□□□□□ -2.22
LSM1O15116 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.18□□□□□ -2.22
LSM1O15116 RN7SKP210-201ENST00000459176 261 ntBASIC1.18□□□□□ -2.22
LSM1O15116 AL163973.1-201ENST00000484753 577 ntBASIC1.18□□□□□ -2.22
LSM1O15116 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.18□□□□□ -2.22
LSM1O15116 AC011406.1-201ENST00000512440 370 ntBASIC1.18□□□□□ -2.22
LSM1O15116 RNU2-34P-201ENST00000516534 121 ntBASIC1.18□□□□□ -2.22
LSM1O15116 AC019176.1-201ENST00000518519 225 ntBASIC1.18□□□□□ -2.22
LSM1O15116 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.18□□□□□ -2.22
LSM1O15116 AC090115.3-201ENST00000553218 849 ntBASIC1.18□□□□□ -2.22
LSM1O15116 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.18□□□□□ -2.22
LSM1O15116 MIR4742-201ENST00000581069 85 ntBASIC1.18□□□□□ -2.22
LSM1O15116 AC104984.5-201ENST00000586878 94 ntBASIC1.18□□□□□ -2.22
LSM1O15116 AC126177.8-201ENST00000618339 1015 ntBASIC1.18□□□□□ -2.22
LSM1O15116 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.18□□□□□ -2.22
LSM1O15116 AC007494.3-201ENST00000624660 743 ntBASIC1.18□□□□□ -2.22
LSM1O15116 MIR338-201ENST00000636369 67 ntBASIC1.18□□□□□ -2.22
LSM1O15116 BX322639.1-202ENST00000423987 2213 ntBASIC1.17□□□□□ -2.22
LSM1O15116 RNU6-545P-201ENST00000362681 104 ntBASIC1.17□□□□□ -2.22
LSM1O15116 RNU6-877P-201ENST00000383868 107 ntBASIC1.17□□□□□ -2.22
LSM1O15116 RNU6-1026P-201ENST00000384465 108 ntBASIC1.17□□□□□ -2.22
LSM1O15116 MT-TH-201ENST00000387441 69 ntBASIC1.17□□□□□ -2.22
LSM1O15116 MIR764-201ENST00000390811 85 ntBASIC1.17□□□□□ -2.22
LSM1O15116 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
LSM1O15116 MTCO2P11-201ENST00000431069 680 ntBASIC1.17□□□□□ -2.22
LSM1O15116 AC009474.2-201ENST00000451383 136 ntBASIC1.17□□□□□ -2.22
LSM1O15116 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.17□□□□□ -2.22
LSM1O15116 snoU13.27-201ENST00000459278 104 ntBASIC1.17□□□□□ -2.22
LSM1O15116 RPS29P27-201ENST00000463711 170 ntBASIC1.17□□□□□ -2.22
LSM1O15116 RN7SKP287-201ENST00000516546 266 ntBASIC1.17□□□□□ -2.22
LSM1O15116 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.17□□□□□ -2.22
LSM1O15116 MTND1P24-201ENST00000552175 861 ntBASIC1.17□□□□□ -2.22
LSM1O15116 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.17□□□□□ -2.22
LSM1O15116 DNAJC19P9-201ENST00000555084 351 ntBASIC1.17□□□□□ -2.22
LSM1O15116 MIR4421-201ENST00000578133 69 ntBASIC1.17□□□□□ -2.22
LSM1O15116 MIR3937-201ENST00000580135 106 ntBASIC1.17□□□□□ -2.22
LSM1O15116 MIR5583-1-201ENST00000580941 59 ntBASIC1.17□□□□□ -2.22
LSM1O15116 NIFKP6-201ENST00000598115 845 ntBASIC1.17□□□□□ -2.22
LSM1O15116 AC093424.1-201ENST00000604999 338 ntBASIC1.17□□□□□ -2.22
LSM1O15116 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.17□□□□□ -2.22
LSM1O15116 Y_RNA.132-201ENST00000363421 102 ntBASIC1.16□□□□□ -2.22
LSM1O15116 RNU6-534P-201ENST00000364877 106 ntBASIC1.16□□□□□ -2.22
LSM1O15116 SNORA18.2-201ENST00000383865 132 ntBASIC1.16□□□□□ -2.22
LSM1O15116 SNORA22-201ENST00000383907 134 ntBASIC1.16□□□□□ -2.22
LSM1O15116 RNU6-418P-201ENST00000384035 107 ntBASIC1.16□□□□□ -2.22
LSM1O15116 SNORA70.7-201ENST00000384159 133 ntBASIC1.16□□□□□ -2.22
LSM1O15116 SNORA22C-201ENST00000384614 134 ntBASIC1.16□□□□□ -2.22
LSM1O15116 RNA5SP213-201ENST00000391031 106 ntBASIC1.16□□□□□ -2.22
LSM1O15116 MIR300-201ENST00000401138 83 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms