Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.43□□□□□ -2.02
ATP2A1O14983 AC007375.1-201ENST00000554513 578 ntBASIC2.43□□□□□ -2.02
ATP2A1O14983 AC021231.3-201ENST00000558497 370 ntBASIC2.43□□□□□ -2.02
ATP2A1O14983 AC243960.4-201ENST00000600532 288 ntBASIC2.43□□□□□ -2.02
ATP2A1O14983 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.43□□□□□ -2.02
ATP2A1O14983 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.43□□□□□ -2.02
ATP2A1O14983 AL008636.1-201ENST00000625038 1018 ntBASIC2.43□□□□□ -2.02
ATP2A1O14983 AL450472.1-202ENST00000637286 180 ntBASIC2.43□□□□□ -2.02
ATP2A1O14983 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.42□□□□□ -2.02
ATP2A1O14983 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
ATP2A1O14983 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
ATP2A1O14983 Y_RNA.123-201ENST00000363338 102 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 MIR524-201ENST00000385242 87 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
ATP2A1O14983 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
ATP2A1O14983 U8.13-201ENST00000390842 128 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 RNU6-1009P-201ENST00000390996 107 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 AL591034.2-201ENST00000402839 359 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 RNU2-63P-201ENST00000410792 194 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 AL353752.1-201ENST00000454946 260 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 CYP2C59P-201ENST00000457790 269 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 SNORD5.1-201ENST00000458800 75 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.42□□□□□ -2.02
ATP2A1O14983 AL138963.2-201ENST00000605137 226 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 AC104260.1-201ENST00000616660 539 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 AC008121.3-201ENST00000618726 433 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 AC099654.5-201ENST00000636479 350 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.42□□□□□ -2.02
ATP2A1O14983 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ATP2A1O14983 AC005336.3-201ENST00000623833 2679 ntBASIC2.42□□□□□ -2.02
ATP2A1O14983 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.41□□□□□ -2.02
ATP2A1O14983 RNU4-56P-201ENST00000364700 142 ntBASIC2.41□□□□□ -2.02
ATP2A1O14983 RNA5SP240-201ENST00000365355 128 ntBASIC2.41□□□□□ -2.02
ATP2A1O14983 RNU6-596P-201ENST00000365395 98 ntBASIC2.41□□□□□ -2.02
ATP2A1O14983 Y_RNA.482-201ENST00000384377 111 ntBASIC2.41□□□□□ -2.02
ATP2A1O14983 MIR29B2-201ENST00000385055 81 ntBASIC2.41□□□□□ -2.02
ATP2A1O14983 MIR95-201ENST00000385072 81 ntBASIC2.41□□□□□ -2.02
ATP2A1O14983 EIF4EP2-201ENST00000422816 654 ntBASIC2.41□□□□□ -2.02
ATP2A1O14983 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.41□□□□□ -2.02
ATP2A1O14983 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.41□□□□□ -2.02
ATP2A1O14983 Y_RNA.635-201ENST00000459041 101 ntBASIC2.41□□□□□ -2.02
ATP2A1O14983 RNU6-567P-201ENST00000516746 107 ntBASIC2.41□□□□□ -2.02
ATP2A1O14983 SNORA31.16-201ENST00000516773 139 ntBASIC2.41□□□□□ -2.02
ATP2A1O14983 FGF7P1-201ENST00000582820 288 ntBASIC2.41□□□□□ -2.02
ATP2A1O14983 AC018462.2-201ENST00000605375 395 ntBASIC2.41□□□□□ -2.02
ATP2A1O14983 MIR6895-201ENST00000613497 78 ntBASIC2.41□□□□□ -2.02
ATP2A1O14983 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.41□□□□□ -2.02
ATP2A1O14983 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
ATP2A1O14983 SNORD50.1-201ENST00000362987 71 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 RNA5SP125-201ENST00000364843 120 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 RNU6-1286P-201ENST00000383871 107 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 RNU6-601P-201ENST00000384540 107 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 SNORA80E-201ENST00000384744 137 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 MIR144-201ENST00000384886 86 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 USP9YP30-201ENST00000430729 455 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.4□□□□□ -2.03
ATP2A1O14983 AL161788.1-201ENST00000441805 169 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.4□□□□□ -2.03
ATP2A1O14983 MTND4P17-201ENST00000470444 350 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.4□□□□□ -2.03
ATP2A1O14983 RNU6-507P-201ENST00000516045 100 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 RNU6-586P-201ENST00000517265 104 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.4□□□□□ -2.03
ATP2A1O14983 PRELID2P1-201ENST00000552837 301 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 MYL12BP1-201ENST00000569826 507 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 AC009127.3-201ENST00000570531 403 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 AC009994.1-201ENST00000606889 253 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 AC090517.3-201ENST00000625170 141 ntBASIC2.4□□□□□ -2.03
ATP2A1O14983 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 snoU2_19.1-201ENST00000362361 80 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 Y_RNA.263-201ENST00000364659 114 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 RNU6-968P-201ENST00000384076 107 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 Y_RNA.474-201ENST00000384341 102 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.39□□□□□ -2.03
ATP2A1O14983 AC093019.1-201ENST00000443135 252 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.39□□□□□ -2.03
ATP2A1O14983 AC079354.2-201ENST00000453523 154 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.39□□□□□ -2.03
ATP2A1O14983 RPL23AP42-201ENST00000471152 471 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 AC108210.2-201ENST00000503681 201 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 AC026782.1-201ENST00000512952 449 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 SNORA48.11-201ENST00000517015 89 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 AC109446.1-201ENST00000566172 220 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.39□□□□□ -2.03
ATP2A1O14983 AC011494.1-201ENST00000596454 237 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 AL078605.1-201ENST00000603529 500 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 Z98751.3-201ENST00000604447 521 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 AL132765.2-201ENST00000610812 351 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 AC063943.3-201ENST00000615562 356 ntBASIC2.39□□□□□ -2.03
ATP2A1O14983 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
ATP2A1O14983 AL356292.1-201ENST00000283110 373 ntBASIC2.38□□□□□ -2.03
ATP2A1O14983 RNU6-1032P-201ENST00000384100 107 ntBASIC2.38□□□□□ -2.03
ATP2A1O14983 RNU6-482P-201ENST00000391068 107 ntBASIC2.38□□□□□ -2.03
ATP2A1O14983 RNU6-174P-201ENST00000410406 106 ntBASIC2.38□□□□□ -2.03
ATP2A1O14983 AL590556.1-201ENST00000423231 483 ntBASIC2.38□□□□□ -2.03
ATP2A1O14983 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.38□□□□□ -2.03
ATP2A1O14983 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.38□□□□□ -2.03
ATP2A1O14983 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms