Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 MIR548AB-201ENST00000584917 84 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 BNIP3P16-201ENST00000589779 534 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 CTHRC1P1-201ENST00000605383 469 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 AC009033.1-201ENST00000624279 431 ntBASIC0.82□□□□□ -2.28
UBFD1O14562 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
UBFD1O14562 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
UBFD1O14562 RNU6-1214P-201ENST00000363650 109 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 RNU5F-7P-201ENST00000363696 115 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 RNY1P12-201ENST00000364251 105 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 SNORD31B-201ENST00000364977 69 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 SNORA4.2-201ENST00000365313 147 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 AC011233.1-201ENST00000422812 283 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.81□□□□□ -2.28
UBFD1O14562 UBE2D3P4-201ENST00000441973 436 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.81□□□□□ -2.28
UBFD1O14562 MTND2P39-201ENST00000457230 764 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 AL163973.1-201ENST00000484753 577 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.81□□□□□ -2.28
UBFD1O14562 MTCO3P7-201ENST00000510008 774 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 MTATP6P9-201ENST00000515039 680 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 AC103996.1-201ENST00000555468 102 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 CYP3A137P-201ENST00000562436 69 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.81□□□□□ -2.28
UBFD1O14562 MIR4775-201ENST00000581168 75 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 RN7SL793P-201ENST00000583259 296 ntBASIC0.81□□□□□ -2.28
UBFD1O14562 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.81□□□□□ -2.28
UBFD1O14562 RNU6-1287P-201ENST00000362914 107 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 U3.9-201ENST00000363823 204 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 RNU1-96P-201ENST00000364163 162 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 RNU6-74P-201ENST00000384235 107 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 RNU6-17P-201ENST00000384245 107 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 RNU6-18P-201ENST00000384527 107 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 RNU6-1060P-201ENST00000384664 107 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 RPS29P13-201ENST00000402041 169 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 AL356776.1-201ENST00000406574 447 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 RN7SKP61-201ENST00000410642 295 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.8□□□□□ -2.28
UBFD1O14562 AL117339.3-201ENST00000418733 162 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 AC060773.1-201ENST00000421698 310 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.8□□□□□ -2.28
UBFD1O14562 AC078809.1-201ENST00000427601 140 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 SNAP23P1-201ENST00000433229 246 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.8□□□□□ -2.28
UBFD1O14562 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
UBFD1O14562 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.8□□□□□ -2.28
UBFD1O14562 AC016925.1-201ENST00000458303 298 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.8□□□□□ -2.28
UBFD1O14562 AC091435.1-201ENST00000505442 584 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 RNU7-40P-201ENST00000516397 64 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 RNU5F-4P-201ENST00000516581 114 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 CENPUP1-201ENST00000526649 1202 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 AP003461.1-201ENST00000528866 78 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 NIFKP6-201ENST00000598115 845 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 AL391646.1-201ENST00000603860 190 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 AL022161.1-201ENST00000604390 213 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 AC069114.2-201ENST00000604699 304 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 AC005014.3-201ENST00000605985 190 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 AL365434.2-201ENST00000607979 234 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 MIR7844-201ENST00000616161 122 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 AC126177.8-201ENST00000618339 1015 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 AC138649.3-201ENST00000622154 254 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 MTND4P14-201ENST00000435799 1354 ntBASIC0.8□□□□□ -2.28
UBFD1O14562 MTND5P17-201ENST00000418405 1603 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 RNU6-545P-201ENST00000362681 104 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 RNU6-552P-201ENST00000362869 119 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 RNU6-1019P-201ENST00000364424 107 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 RNU6-877P-201ENST00000383868 107 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 RNU6-418P-201ENST00000384035 107 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 RNU6-925P-201ENST00000384629 104 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 SNORA26.3-201ENST00000391119 136 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 RNU1-139P-201ENST00000391307 165 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 ARL5AP1-201ENST00000418991 388 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.79□□□□□ -2.28
UBFD1O14562 EIF1P1-201ENST00000421436 341 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 RPL23AP95-201ENST00000426806 265 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.79□□□□□ -2.28
UBFD1O14562 AC073614.1-201ENST00000438690 650 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.79□□□□□ -2.28
UBFD1O14562 AC073910.1-201ENST00000445047 438 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.79□□□□□ -2.28
UBFD1O14562 RNU6-1132P-201ENST00000459214 107 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.79□□□□□ -2.28
UBFD1O14562 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.79□□□□□ -2.28
UBFD1O14562 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.79□□□□□ -2.28
UBFD1O14562 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.79□□□□□ -2.28
UBFD1O14562 AC079140.3-201ENST00000511111 550 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 RNA5SP384-201ENST00000516615 116 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 EIF4A1P12-201ENST00000551910 141 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.79□□□□□ -2.28
UBFD1O14562 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 Z98751.3-201ENST00000604447 521 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 U6.114-201ENST00000636407 96 ntBASIC0.79□□□□□ -2.28
UBFD1O14562 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
UBFD1O14562 RNY4P34-201ENST00000364779 95 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 RNU6-827P-201ENST00000365553 106 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 RNU2-8P-201ENST00000410727 190 ntBASIC0.78□□□□□ -2.28
UBFD1O14562 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 233.3 ms