Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC091874.1-201ENST00000511402 339 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 RNU6-415P-201ENST00000516252 97 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 RNA5SP437-201ENST00000517249 129 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.01□□□□□ -2.25
UPK1AO00322 AP002963.1-201ENST00000530590 184 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.01□□□□□ -2.25
UPK1AO00322 AC064807.4-201ENST00000607201 407 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 AC024933.1-201ENST00000608472 348 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
UPK1AO00322 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.01□□□□□ -2.25
UPK1AO00322 AC009161.2-201ENST00000624626 138 ntBASIC1.01□□□□□ -2.25
UPK1AO00322 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
UPK1AO00322 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
UPK1AO00322 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
UPK1AO00322 FGF7P2-201ENST00000332473 296 ntBASIC1□□□□□ -2.25
UPK1AO00322 RNU6-282P-201ENST00000365357 103 ntBASIC1□□□□□ -2.25
UPK1AO00322 RNY3P10-201ENST00000384764 102 ntBASIC1□□□□□ -2.25
UPK1AO00322 MRPL35P1-201ENST00000404272 572 ntBASIC1□□□□□ -2.25
UPK1AO00322 RNU2-9P-201ENST00000410194 145 ntBASIC1□□□□□ -2.25
UPK1AO00322 Y_RNA.595-201ENST00000410403 105 ntBASIC1□□□□□ -2.25
UPK1AO00322 RNU2-29P-201ENST00000410423 189 ntBASIC1□□□□□ -2.25
UPK1AO00322 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1□□□□□ -2.25
UPK1AO00322 AC090960.1-201ENST00000421072 306 ntBASIC1□□□□□ -2.25
UPK1AO00322 AC012306.1-201ENST00000423267 114 ntBASIC1□□□□□ -2.25
UPK1AO00322 RPS27P16-201ENST00000425758 201 ntBASIC1□□□□□ -2.25
UPK1AO00322 USP9YP28-201ENST00000435142 589 ntBASIC1□□□□□ -2.25
UPK1AO00322 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1□□□□□ -2.25
UPK1AO00322 SNRPGP9-201ENST00000456025 225 ntBASIC1□□□□□ -2.25
UPK1AO00322 AC007547.1-201ENST00000462177 490 ntBASIC1□□□□□ -2.25
UPK1AO00322 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1□□□□□ -2.25
UPK1AO00322 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1□□□□□ -2.25
UPK1AO00322 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1□□□□□ -2.25
UPK1AO00322 RNU6-1041P-201ENST00000516254 102 ntBASIC1□□□□□ -2.25
UPK1AO00322 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1□□□□□ -2.25
UPK1AO00322 SNORA59B-202ENST00000578183 701 ntBASIC1□□□□□ -2.25
UPK1AO00322 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1□□□□□ -2.25
UPK1AO00322 RNU6-85P-201ENST00000605989 107 ntBASIC1□□□□□ -2.25
UPK1AO00322 MIR3976-201ENST00000606807 139 ntBASIC1□□□□□ -2.25
UPK1AO00322 AC009994.1-201ENST00000606889 253 ntBASIC1□□□□□ -2.25
UPK1AO00322 AC008536.2-201ENST00000607284 349 ntBASIC1□□□□□ -2.25
UPK1AO00322 AL355802.3-201ENST00000607571 545 ntBASIC1□□□□□ -2.25
UPK1AO00322 U2.17-201ENST00000611454 95 ntBASIC1□□□□□ -2.25
UPK1AO00322 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.99□□□□□ -2.25
UPK1AO00322 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
UPK1AO00322 RNU1-76P-201ENST00000362903 159 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 RNU6-181P-201ENST00000363225 107 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 Y_RNA.201-201ENST00000364052 96 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 SNORA25.8-201ENST00000364831 128 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 Y_RNA.327-201ENST00000365201 102 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 RNU6-53P-201ENST00000365367 106 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 SNORA36A-201ENST00000384221 132 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 RNU6-1065P-201ENST00000384513 106 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 RNU6-606P-201ENST00000384721 111 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 MIR548B-201ENST00000385247 97 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 MT-TH-201ENST00000387441 69 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 RNU6-1093P-201ENST00000391194 107 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 PIGFP2-201ENST00000421400 651 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 TOMM22P2-201ENST00000430735 237 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 AC245047.4-201ENST00000433189 144 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.99□□□□□ -2.25
UPK1AO00322 AL163540.1-201ENST00000485382 386 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.99□□□□□ -2.25
UPK1AO00322 RNU6-445P-201ENST00000516949 107 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.99□□□□□ -2.25
UPK1AO00322 AC019288.1-201ENST00000557918 224 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 AC005668.1-201ENST00000571142 476 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 MIR3915-201ENST00000578518 97 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 AC093424.1-201ENST00000604999 338 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 SNORD114-21-201ENST00000606412 72 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.99□□□□□ -2.25
UPK1AO00322 AL078604.3-201ENST00000615580 211 ntBASIC0.99□□□□□ -2.25
UPK1AO00322 AL390237.1-201ENST00000404226 1415 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 MTND5P35-201ENST00000557537 1720 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.98□□□□□ -2.25
UPK1AO00322 MIR302D-201ENST00000362275 68 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 RNU6-297P-201ENST00000384636 107 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 AP000275.1-201ENST00000411943 390 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.98□□□□□ -2.25
UPK1AO00322 AL161935.2-201ENST00000414627 60 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 COX6CP10-201ENST00000416832 224 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 SNRPEP10-201ENST00000420249 274 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 AL365203.2-201ENST00000423444 196 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 AL603825.1-201ENST00000438481 80 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 AC027119.1-201ENST00000440877 241 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.98□□□□□ -2.25
UPK1AO00322 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.98□□□□□ -2.25
UPK1AO00322 RNU7-167P-201ENST00000459160 62 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 AC108078.1-201ENST00000508073 725 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 AC105417.1-201ENST00000514691 285 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.98□□□□□ -2.25
UPK1AO00322 SUB1P2-201ENST00000556401 297 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 AGGF1P4-201ENST00000568249 801 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 MIR4295-201ENST00000585286 85 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 AC005520.5-201ENST00000613926 164 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 AC095038.3-201ENST00000634439 195 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 AL450472.1-202ENST00000637286 180 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 AC009541.1-201ENST00000438279 2662 ntBASIC0.98□□□□□ -2.25
UPK1AO00322 RNU4-21P-201ENST00000362802 126 ntBASIC0.97□□□□□ -2.25
UPK1AO00322 SNORA18.2-201ENST00000383865 132 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms