Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC073413.2-201ENST00000604332 360 ntBASIC1.26□□□□□ -2.21
AP3B1O00203 Z98751.3-201ENST00000604447 521 ntBASIC1.26□□□□□ -2.21
AP3B1O00203 AP001836.1-201ENST00000604675 523 ntBASIC1.26□□□□□ -2.21
AP3B1O00203 AC064807.4-201ENST00000607201 407 ntBASIC1.26□□□□□ -2.21
AP3B1O00203 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.26□□□□□ -2.21
AP3B1O00203 AC009161.2-201ENST00000624626 138 ntBASIC1.26□□□□□ -2.21
AP3B1O00203 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
AP3B1O00203 Y_RNA.399-201ENST00000383955 105 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 SNORA70.7-201ENST00000384159 133 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 RNU6-606P-201ENST00000384721 111 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.25□□□□□ -2.21
AP3B1O00203 PIGFP2-201ENST00000421400 651 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.25□□□□□ -2.21
AP3B1O00203 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.25□□□□□ -2.21
AP3B1O00203 AC132479.1-201ENST00000449160 144 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 AC009474.2-201ENST00000451383 136 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 SNRPGP9-201ENST00000456025 225 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 HMGN2P9-201ENST00000476875 229 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.25□□□□□ -2.21
AP3B1O00203 AP002963.1-201ENST00000530590 184 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 AP001596.2-201ENST00000608410 312 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 AC005520.5-201ENST00000613926 164 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 AL391262.2-201ENST00000622466 494 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 SNORA43.4-201ENST00000629559 138 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 AC099654.5-201ENST00000636479 350 ntBASIC1.25□□□□□ -2.21
AP3B1O00203 SNORA36A-201ENST00000384221 132 ntBASIC1.24□□□□□ -2.21
AP3B1O00203 Y_RNA.504-201ENST00000384481 104 ntBASIC1.24□□□□□ -2.21
AP3B1O00203 RNY3P10-201ENST00000384764 102 ntBASIC1.24□□□□□ -2.21
AP3B1O00203 SNORA17.3-201ENST00000391159 129 ntBASIC1.24□□□□□ -2.21
AP3B1O00203 MIR208B-201ENST00000401172 77 ntBASIC1.24□□□□□ -2.21
AP3B1O00203 RNU2-29P-201ENST00000410423 189 ntBASIC1.24□□□□□ -2.21
AP3B1O00203 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.24□□□□□ -2.21
AP3B1O00203 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.24□□□□□ -2.21
AP3B1O00203 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.24□□□□□ -2.21
AP3B1O00203 PGBD4P5-201ENST00000445958 426 ntBASIC1.24□□□□□ -2.21
AP3B1O00203 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.24□□□□□ -2.21
AP3B1O00203 AC008628.2-201ENST00000502605 298 ntBASIC1.24□□□□□ -2.21
AP3B1O00203 RNU6-856P-201ENST00000516959 98 ntBASIC1.24□□□□□ -2.21
AP3B1O00203 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.24□□□□□ -2.21
AP3B1O00203 CYP3A52P-201ENST00000563326 91 ntBASIC1.24□□□□□ -2.21
AP3B1O00203 MIR3941-201ENST00000582572 103 ntBASIC1.24□□□□□ -2.21
AP3B1O00203 AC023043.2-201ENST00000589678 1026 ntBASIC1.24□□□□□ -2.21
AP3B1O00203 AC009994.1-201ENST00000606889 253 ntBASIC1.24□□□□□ -2.21
AP3B1O00203 RNA5SP327-201ENST00000362494 101 ntBASIC1.23□□□□□ -2.21
AP3B1O00203 RNU4-91P-201ENST00000364778 135 ntBASIC1.23□□□□□ -2.21
AP3B1O00203 SNORA72.2-201ENST00000365028 127 ntBASIC1.23□□□□□ -2.21
AP3B1O00203 SNORA26.8-201ENST00000391306 124 ntBASIC1.23□□□□□ -2.21
AP3B1O00203 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.23□□□□□ -2.21
AP3B1O00203 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.23□□□□□ -2.21
AP3B1O00203 TOMM22P2-201ENST00000430735 237 ntBASIC1.23□□□□□ -2.21
AP3B1O00203 RPS26P45-201ENST00000471748 340 ntBASIC1.23□□□□□ -2.21
AP3B1O00203 AL163973.1-201ENST00000484753 577 ntBASIC1.23□□□□□ -2.21
AP3B1O00203 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.23□□□□□ -2.21
AP3B1O00203 RNU6-1041P-201ENST00000516254 102 ntBASIC1.23□□□□□ -2.21
AP3B1O00203 AC069113.1-201ENST00000517763 267 ntBASIC1.23□□□□□ -2.21
AP3B1O00203 AL353149.1-201ENST00000610667 244 ntBASIC1.23□□□□□ -2.21
AP3B1O00203 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.23□□□□□ -2.21
AP3B1O00203 AL353997.5-201ENST00000618886 171 ntBASIC1.23□□□□□ -2.21
AP3B1O00203 AL359697.1-201ENST00000624879 587 ntBASIC1.23□□□□□ -2.21
AP3B1O00203 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
AP3B1O00203 RNU6-877P-201ENST00000383868 107 ntBASIC1.22□□□□□ -2.21
AP3B1O00203 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
AP3B1O00203 MIR300-201ENST00000401138 83 ntBASIC1.22□□□□□ -2.21
AP3B1O00203 RNU2-9P-201ENST00000410194 145 ntBASIC1.22□□□□□ -2.21
AP3B1O00203 USP9YP28-201ENST00000435142 589 ntBASIC1.22□□□□□ -2.21
AP3B1O00203 AL445567.1-201ENST00000439121 144 ntBASIC1.22□□□□□ -2.21
AP3B1O00203 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.22□□□□□ -2.21
AP3B1O00203 RNU7-167P-201ENST00000459160 62 ntBASIC1.22□□□□□ -2.21
AP3B1O00203 AC067942.3-201ENST00000512025 362 ntBASIC1.22□□□□□ -2.21
AP3B1O00203 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
AP3B1O00203 RNU2-34P-201ENST00000516534 121 ntBASIC1.22□□□□□ -2.21
AP3B1O00203 RN7SKP219-201ENST00000516825 296 ntBASIC1.22□□□□□ -2.21
AP3B1O00203 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.22□□□□□ -2.21
AP3B1O00203 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.22□□□□□ -2.21
AP3B1O00203 AC025449.1-201ENST00000603896 529 ntBASIC1.22□□□□□ -2.21
AP3B1O00203 AC008147.4-201ENST00000617570 1204 ntBASIC1.22□□□□□ -2.21
AP3B1O00203 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
AP3B1O00203 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 Y_RNA.201-201ENST00000364052 96 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 MIR194-1-201ENST00000384892 85 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.21□□□□□ -2.22
AP3B1O00203 RNU4-62P-201ENST00000410125 130 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 AP000275.1-201ENST00000411943 390 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 AC004965.1-201ENST00000413033 213 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.21□□□□□ -2.22
AP3B1O00203 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.21□□□□□ -2.22
AP3B1O00203 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.21□□□□□ -2.22
AP3B1O00203 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.21□□□□□ -2.22
AP3B1O00203 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 SNRPFP3-201ENST00000457792 225 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 AC105417.1-201ENST00000514691 285 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 AL137161.1-201ENST00000532231 390 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 AL512310.8-201ENST00000550183 120 ntBASIC1.21□□□□□ -2.22
AP3B1O00203 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.21□□□□□ -2.22
AP3B1O00203 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms