Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PDLIM1O00151 AC007547.1-201ENST00000462177 490 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 HMGN2P26-201ENST00000463169 339 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.77□□□□□ -2.13
PDLIM1O00151 MTCO1P29-201ENST00000496868 288 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 AC021146.2-201ENST00000504736 556 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.77□□□□□ -2.13
PDLIM1O00151 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.77□□□□□ -2.13
PDLIM1O00151 AC116312.1-201ENST00000606841 314 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 AC104458.1-201ENST00000608243 463 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 U4.5-201ENST00000617137 123 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 SNORA43.4-201ENST00000629559 138 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.77□□□□□ -2.13
PDLIM1O00151 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
PDLIM1O00151 AL450472.1-202ENST00000637286 180 ntBASIC1.77□□□□□ -2.13
PDLIM1O00151 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
PDLIM1O00151 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PDLIM1O00151 Y_RNA.123-201ENST00000363338 102 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 Y_RNA.295-201ENST00000364918 102 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 RNU6-128P-201ENST00000383976 107 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 SNORD14D-201ENST00000384390 87 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 Y_RNA.530-201ENST00000384587 101 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 RNU11-3P-201ENST00000391111 133 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 SNORD115-47-201ENST00000391226 86 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
PDLIM1O00151 AL357139.1-201ENST00000407792 426 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 RNA5SP201-201ENST00000410316 124 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 VN1R36P-201ENST00000414936 291 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 SNRPEP10-201ENST00000420249 274 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.76□□□□□ -2.13
PDLIM1O00151 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.76□□□□□ -2.13
PDLIM1O00151 HMGN2P18-201ENST00000450680 270 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 RPS29P27-201ENST00000463711 170 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 AC092989.1-201ENST00000481235 277 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.76□□□□□ -2.13
PDLIM1O00151 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.76□□□□□ -2.13
PDLIM1O00151 RNA5SP490-201ENST00000517141 136 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.76□□□□□ -2.13
PDLIM1O00151 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 AP005660.1-201ENST00000522972 293 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 EIF4A1P12-201ENST00000551910 141 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.76□□□□□ -2.13
PDLIM1O00151 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.76□□□□□ -2.13
PDLIM1O00151 RMST_3.1-201ENST00000611651 109 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
PDLIM1O00151 AL773524.1-201ENST00000614065 229 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 AL359314.1-201ENST00000616913 261 ntBASIC1.76□□□□□ -2.13
PDLIM1O00151 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.76□□□□□ -2.13
PDLIM1O00151 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
PDLIM1O00151 Y_RNA.89-201ENST00000363031 102 ntBASIC1.75□□□□□ -2.13
PDLIM1O00151 Y_RNA.100-201ENST00000363141 102 ntBASIC1.75□□□□□ -2.13
PDLIM1O00151 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
PDLIM1O00151 RNU6-790P-201ENST00000384479 105 ntBASIC1.75□□□□□ -2.13
PDLIM1O00151 RNU6-1093P-201ENST00000391194 107 ntBASIC1.75□□□□□ -2.13
PDLIM1O00151 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.75□□□□□ -2.13
PDLIM1O00151 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.75□□□□□ -2.13
PDLIM1O00151 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.75□□□□□ -2.13
PDLIM1O00151 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.75□□□□□ -2.13
PDLIM1O00151 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.75□□□□□ -2.13
PDLIM1O00151 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.75□□□□□ -2.13
PDLIM1O00151 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.75□□□□□ -2.13
PDLIM1O00151 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.75□□□□□ -2.13
PDLIM1O00151 AL136221.1-201ENST00000621449 509 ntBASIC1.75□□□□□ -2.13
PDLIM1O00151 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.75□□□□□ -2.13
PDLIM1O00151 AC245060.5-201ENST00000610778 3293 ntBASIC1.75□□□□□ -2.13
PDLIM1O00151 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.74□□□□□ -2.13
PDLIM1O00151 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
PDLIM1O00151 Y_RNA.6-201ENST00000362350 114 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PDLIM1O00151 ZNF885P-201ENST00000420174 1098 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.74□□□□□ -2.13
PDLIM1O00151 AC244636.1-201ENST00000421152 228 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 BX510359.4-201ENST00000423750 193 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 AC010095.1-201ENST00000443543 144 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.74□□□□□ -2.13
PDLIM1O00151 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.74□□□□□ -2.13
PDLIM1O00151 snoU13.6-201ENST00000458785 104 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 TRBVA-201ENST00000498804 316 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.74□□□□□ -2.13
PDLIM1O00151 RNU6-718P-201ENST00000516166 105 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 CBX3P4-201ENST00000538909 354 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 AC146944.4-201ENST00000602697 718 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 AL022345.1-201ENST00000607292 135 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 MIR8076-201ENST00000611401 83 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 AC090517.2-201ENST00000614966 680 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 AC100810.6-201ENST00000638068 285 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 AC073869.6-201ENST00000640656 341 ntBASIC1.74□□□□□ -2.13
PDLIM1O00151 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.73□□□□□ -2.13
PDLIM1O00151 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.73□□□□□ -2.13
PDLIM1O00151 RNU6-438P-201ENST00000365561 103 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 SNORA29-201ENST00000384183 140 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
PDLIM1O00151 RNA5SP212-201ENST00000391223 107 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 MIR548F1-201ENST00000408667 84 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 RNA5SP494-201ENST00000410653 129 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 RN7SKP51-201ENST00000410781 304 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 RNU2-41P-201ENST00000410991 178 ntBASIC1.73□□□□□ -2.13
PDLIM1O00151 AC009161.1-201ENST00000417306 376 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 251.9 ms