Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.98□□□□□ -2.09
NPIPA3F8WFD2 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 SNORD114-1-201ENST00000362705 72 ntBASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 RNU6-1286P-201ENST00000383871 107 ntBASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 RNU6-306P-201ENST00000384617 107 ntBASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 RNU2-41P-201ENST00000410991 178 ntBASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 RPL30P16-201ENST00000419341 429 ntBASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 HMGN2P3-201ENST00000433603 273 ntBASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 HMGN2P5-201ENST00000436882 273 ntBASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 RNA5SP200-201ENST00000516360 103 ntBASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 RNU6-358P-201ENST00000516564 75 ntBASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 AP003033.1-201ENST00000527244 415 ntBASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 MIR4524B-201ENST00000581569 115 ntBASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 AC009248.2-201ENST00000619826 254 ntBASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 AC233981.2-201ENST00000611524 1614 ntBASIC1.97□□□□□ -2.09
NPIPA3F8WFD2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 SNORA16B-201ENST00000364674 135 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 RNU6-234P-201ENST00000365229 104 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 RNU6-784P-201ENST00000384330 106 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 AL023284.1-201ENST00000403956 276 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 SRIP3-201ENST00000413200 219 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 MTATP6P13-201ENST00000438531 667 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 HMGN2P18-201ENST00000450680 270 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 FGF7P6-202ENST00000451282 293 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 AC132942.1-201ENST00000486753 483 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 AC018710.1-201ENST00000506509 158 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 AC005741.1-201ENST00000511094 432 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 RNU6-566P-201ENST00000516790 107 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 AC016256.1-201ENST00000547971 354 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 AC090517.1-201ENST00000569307 266 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 AC124303.1-201ENST00000605703 360 ntBASIC1.96□□□□□ -2.1
NPIPA3F8WFD2 RNU5B-2P-201ENST00000363036 113 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 Y_RNA.248-201ENST00000364501 109 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 Y_RNA.301-201ENST00000364990 103 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 SNORD14D-201ENST00000384390 87 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 MIR518A2-201ENST00000384966 87 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 SNORA48.3-201ENST00000391081 134 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 AL079342.1-201ENST00000401460 267 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 RNU2-40P-201ENST00000410833 196 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 AL356379.1-201ENST00000414105 126 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 AC245102.2-201ENST00000448956 180 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 PPP1R2P5-201ENST00000457256 603 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 AC055731.1-201ENST00000474387 401 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 MTCO2P30-201ENST00000503662 364 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 ACA59.1-201ENST00000515966 143 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 RNA5SP490-201ENST00000517141 136 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 RNA5SP454-201ENST00000517231 127 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 RNU2-19P-201ENST00000517288 84 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 MIR4529-201ENST00000578110 78 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 AC007229.1-201ENST00000590455 412 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 AC005520.5-201ENST00000613926 164 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 MIR219B-201ENST00000637023 88 ntBASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.95□□□□□ -2.1
NPIPA3F8WFD2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 RNU6-510P-201ENST00000391239 108 ntBASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 AL356776.1-201ENST00000406574 447 ntBASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 AL357139.1-201ENST00000407792 426 ntBASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 RNU6-329P-201ENST00000459618 107 ntBASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 AF186996.7-201ENST00000492781 209 ntBASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 Y_RNA.682-201ENST00000516457 100 ntBASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 RNU5F-4P-201ENST00000516581 114 ntBASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 SCARNA16.3-201ENST00000516595 184 ntBASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 AP005639.2-201ENST00000527592 928 ntBASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 AC060780.3-201ENST00000589464 80 ntBASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 AC009994.1-201ENST00000606889 253 ntBASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 AL359314.1-201ENST00000616913 261 ntBASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 MTND4P5-201ENST00000435821 1374 ntBASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NPIPA3F8WFD2 RNU6-1159P-201ENST00000362933 107 ntBASIC1.93□□□□□ -2.1
NPIPA3F8WFD2 SNORD50.1-201ENST00000362987 71 ntBASIC1.93□□□□□ -2.1
NPIPA3F8WFD2 RNU4-52P-201ENST00000384209 138 ntBASIC1.93□□□□□ -2.1
NPIPA3F8WFD2 MIR29C-201ENST00000385231 88 ntBASIC1.93□□□□□ -2.1
NPIPA3F8WFD2 MIR549A-201ENST00000385268 96 ntBASIC1.93□□□□□ -2.1
NPIPA3F8WFD2 SNORA40.19-201ENST00000390846 128 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms