Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC107953.1-201ENST00000522216 297 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AL133215.3-201ENST00000609801 448 ntBASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NEDD8-MDP1E9PL57 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 AC009541.1-201ENST00000438279 2662 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 Y_RNA.86-201ENST00000363020 111 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 SNORD32B-201ENST00000364460 84 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 Y_RNA.301-201ENST00000364990 103 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 Y_RNA.504-201ENST00000384481 104 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 BTF3L4P2-201ENST00000392798 346 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 MTCYBP2-201ENST00000407745 171 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 SNORD23.1-201ENST00000408212 104 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU2-32P-201ENST00000411193 191 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU6-717P-201ENST00000459076 104 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 AC145146.1-201ENST00000496370 254 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 AC034114.1-201ENST00000520293 285 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 NDUFA5P6-201ENST00000542110 379 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 AC060780.3-201ENST00000589464 80 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 AL670379.2-201ENST00000604983 252 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 AC022202.1-201ENST00000613515 211 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 AC009033.1-201ENST00000624279 431 ntBASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU6-562P-201ENST00000362731 107 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 Y_RNA.151-201ENST00000363566 112 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU6-546P-201ENST00000383991 107 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 SNORA46.1-201ENST00000391069 153 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 RN7SKP158-201ENST00000410453 326 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU2-40P-201ENST00000410833 196 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 AC009161.1-201ENST00000417306 376 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 U8.21-201ENST00000459536 136 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 AC005741.1-201ENST00000511094 432 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 AC118273.2-201ENST00000532092 465 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 MIR8076-201ENST00000611401 83 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 AC098657.3-201ENST00000620434 263 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
NEDD8-MDP1E9PL57 SNORA32.2-201ENST00000384049 122 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 SNORA12-201ENST00000391162 147 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 RNA5SP338-201ENST00000410495 85 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 EDDM3CP-201ENST00000415977 425 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 CBX3P6-201ENST00000430257 527 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 MTATP6P13-201ENST00000438531 667 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 RNA5SP233-201ENST00000459153 113 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU6-329P-201ENST00000459618 107 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 MTCO2P30-201ENST00000503662 364 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 SNORA4.4-201ENST00000515921 135 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU4-49P-201ENST00000516080 140 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 AC022616.8-201ENST00000533569 253 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 AC007375.1-201ENST00000554513 578 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 Z98751.3-201ENST00000604447 521 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 MIR3976-201ENST00000606807 139 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 PCGEM1.1-201ENST00000613431 131 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 AC009248.2-201ENST00000619826 254 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 AC091932.3-201ENST00000624223 323 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 MIR1248-201ENST00000629190 106 ntBASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
NEDD8-MDP1E9PL57 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
NEDD8-MDP1E9PL57 RNU1-17P-201ENST00000363022 152 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 SNORA29-201ENST00000384183 140 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-378P-201ENST00000384324 107 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-784P-201ENST00000384330 106 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 MIR17-201ENST00000385012 84 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 MTND1P2-201ENST00000430604 821 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 AC130509.1-201ENST00000464158 433 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 AC114801.2-201ENST00000503825 781 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-965P-201ENST00000516721 96 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-566P-201ENST00000516790 107 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 RNU6-667P-201ENST00000517186 102 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 MRPS36P4-201ENST00000534436 298 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 AC016256.1-201ENST00000547971 354 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 AC021231.3-201ENST00000558497 370 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 MIR3923-201ENST00000579521 83 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 AC005520.5-201ENST00000613926 164 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 AL162373.1-201ENST00000620433 407 ntBASIC1.9□□□□□ -2.11
NEDD8-MDP1E9PL57 AC084768.2-201ENST00000622736 221 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms