Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RNU1-51P-201ENST00000365345 176 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 Y_RNA.482-201ENST00000384377 111 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 MTCYBP4-201ENST00000401524 249 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 AL357139.1-201ENST00000407792 426 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 RN7SKP284-201ENST00000411002 343 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 RNA5SP184-201ENST00000411071 108 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 RNU6-325P-201ENST00000411132 105 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 AC012306.1-201ENST00000423267 114 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 MTCYBP6-201ENST00000441810 138 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 RNU7-152P-201ENST00000458982 64 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 AC018868.1-201ENST00000491307 315 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.94□□□□□ -2.1
SRRM4A7MD48 SCARNA15.1-201ENST00000516384 125 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 SNORA31.11-201ENST00000516528 139 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 RNU6-1016P-201ENST00000516689 94 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 AP003072.1-201ENST00000531740 145 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.94□□□□□ -2.1
SRRM4A7MD48 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.94□□□□□ -2.1
SRRM4A7MD48 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.94□□□□□ -2.1
SRRM4A7MD48 Z98751.3-201ENST00000604447 521 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 AC080078.3-201ENST00000605407 463 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SRRM4A7MD48 AC090971.5-201ENST00000621102 293 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.94□□□□□ -2.1
SRRM4A7MD48 AL365361.1-201ENST00000566942 3481 ntBASIC1.94□□□□□ -2.1
SRRM4A7MD48 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SRRM4A7MD48 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
SRRM4A7MD48 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SRRM4A7MD48 RNU6-1159P-201ENST00000362933 107 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 Y_RNA.111-201ENST00000363248 100 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 SNORA63-201ENST00000363450 132 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 SNORD32B-201ENST00000364460 84 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 RNU6-593P-201ENST00000364716 112 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 RNU6-26P-201ENST00000383985 107 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 Y_RNA.473-201ENST00000384333 102 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 MIR521-1-201ENST00000384902 87 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SRRM4A7MD48 AL359511.1-201ENST00000402970 211 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 MTND3P9-201ENST00000429526 346 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 AC005534.2-201ENST00000431047 433 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.93□□□□□ -2.1
SRRM4A7MD48 PCMTD1P1-201ENST00000455560 355 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 RNU7-187P-201ENST00000458985 68 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 Y_RNA.653-201ENST00000459091 95 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 RPS29P27-201ENST00000463711 170 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 AC027575.1-201ENST00000481064 460 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.93□□□□□ -2.1
SRRM4A7MD48 AC116337.1-201ENST00000509680 687 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.93□□□□□ -2.1
SRRM4A7MD48 AC093303.1-201ENST00000514549 295 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 SNORA4.4-201ENST00000515921 135 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 RNU6-1170P-201ENST00000515974 106 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 RNA5SP148-201ENST00000516527 94 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 RNU6-1213P-201ENST00000517075 94 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.93□□□□□ -2.1
SRRM4A7MD48 EIF4A1P12-201ENST00000551910 141 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 MIR4529-201ENST00000578110 78 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.93□□□□□ -2.1
SRRM4A7MD48 AC067747.1-201ENST00000608026 250 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 MIR6817-201ENST00000615588 66 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 AL132822.1-201ENST00000617063 513 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 AC098657.3-201ENST00000620434 263 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
SRRM4A7MD48 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SRRM4A7MD48 KPNA2P1-201ENST00000458289 1591 ntBASIC1.93□□□□□ -2.1
SRRM4A7MD48 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.92□□□□□ -2.1
SRRM4A7MD48 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
SRRM4A7MD48 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SRRM4A7MD48 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
SRRM4A7MD48 SNORA5B-201ENST00000363786 132 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 RNU6-944P-201ENST00000364023 107 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 Y_RNA.326-201ENST00000365176 113 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 SNORD42.2-201ENST00000365570 69 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 RNU6-1286P-201ENST00000383871 107 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 RNU6-790P-201ENST00000384479 105 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 RNU6-306P-201ENST00000384617 107 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 SNORA46.1-201ENST00000391069 153 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 MTCO3P10-201ENST00000455912 772 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.92□□□□□ -2.1
SRRM4A7MD48 RPL30P15-201ENST00000457129 321 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 AC026436.1-201ENST00000510537 270 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 AC107222.1-201ENST00000510899 637 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 ACA59.1-201ENST00000515966 143 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 SNORA31.16-201ENST00000516773 139 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 RNU1-54P-201ENST00000517181 120 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.92□□□□□ -2.1
SRRM4A7MD48 AC020661.2-201ENST00000560114 134 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.92□□□□□ -2.1
SRRM4A7MD48 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
SRRM4A7MD48 AC022432.1-201ENST00000595739 310 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 AL031274.2-201ENST00000599419 203 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 AL049779.4-201ENST00000604500 156 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 AL080274.1-201ENST00000605565 220 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 PCGEM1.1-201ENST00000613431 131 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 AL669831.3-213ENST00000636676 183 ntBASIC1.92□□□□□ -2.1
SRRM4A7MD48 Y_RNA.146-201ENST00000363549 102 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 Y_RNA.151-201ENST00000363566 112 ntBASIC1.91□□□□□ -2.1
SRRM4A7MD48 SNORA3A-201ENST00000364113 130 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 390.8 ms