Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-1.13□□□□□ -2.59
LINC01549A6NIU2 AL390123.1-201ENST00000603216 237 ntBASIC-1.13□□□□□ -2.59
LINC01549A6NIU2 AL391099.1-201ENST00000624635 187 ntBASIC-1.13□□□□□ -2.59
LINC01549A6NIU2 SEC63P2-201ENST00000503863 1939 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 RNU4-9P-201ENST00000364951 139 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 SNORA2.2-201ENST00000365473 135 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 SNORA2A-201ENST00000383885 135 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 RNU6-637P-201ENST00000384050 107 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 Y_RNA.508-201ENST00000384502 114 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 MIR660-201ENST00000385235 97 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 MTND4P32-201ENST00000437189 1237 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 NDUFA5P7-201ENST00000452914 242 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 MTND3P4-201ENST00000453537 303 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 RPL37P6-201ENST00000460682 294 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 LAMTOR3P2-201ENST00000504479 232 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 RNU7-129P-201ENST00000516128 62 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 SNRPGP1-201ENST00000553864 222 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 AC093519.1-201ENST00000566109 298 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 LARP7P2-201ENST00000575306 125 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 SNORA59B-202ENST00000578183 701 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 BNIP3P24-201ENST00000593398 557 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 AC024940.5-201ENST00000622889 474 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 MIR4788-201ENST00000639104 80 ntBASIC-1.14□□□□□ -2.59
LINC01549A6NIU2 RNU6-438P-201ENST00000365561 103 ntBASIC-1.15□□□□□ -2.59
LINC01549A6NIU2 MIR520G-201ENST00000385064 90 ntBASIC-1.15□□□□□ -2.59
LINC01549A6NIU2 MIR520H-201ENST00000385126 88 ntBASIC-1.15□□□□□ -2.59
LINC01549A6NIU2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-1.15□□□□□ -2.59
LINC01549A6NIU2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-1.15□□□□□ -2.59
LINC01549A6NIU2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-1.15□□□□□ -2.59
LINC01549A6NIU2 AC013262.1-201ENST00000426710 252 ntBASIC-1.15□□□□□ -2.59
LINC01549A6NIU2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-1.15□□□□□ -2.59
LINC01549A6NIU2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-1.15□□□□□ -2.59
LINC01549A6NIU2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-1.15□□□□□ -2.59
LINC01549A6NIU2 AC114755.3-201ENST00000481111 251 ntBASIC-1.15□□□□□ -2.59
LINC01549A6NIU2 SNORD116-30-201ENST00000516468 85 ntBASIC-1.15□□□□□ -2.59
LINC01549A6NIU2 AP003716.2-201ENST00000528260 108 ntBASIC-1.15□□□□□ -2.59
LINC01549A6NIU2 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-1.15□□□□□ -2.59
LINC01549A6NIU2 RNA5SP98-201ENST00000363158 137 ntBASIC-1.16□□□□□ -2.6
LINC01549A6NIU2 RNU6-1184P-201ENST00000384588 108 ntBASIC-1.16□□□□□ -2.6
LINC01549A6NIU2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-1.16□□□□□ -2.6
LINC01549A6NIU2 AC010154.1-201ENST00000425857 269 ntBASIC-1.16□□□□□ -2.6
LINC01549A6NIU2 AC020550.1-201ENST00000447385 163 ntBASIC-1.16□□□□□ -2.6
LINC01549A6NIU2 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-1.16□□□□□ -2.6
LINC01549A6NIU2 MTND2P33-201ENST00000506452 1031 ntBASIC-1.16□□□□□ -2.6
LINC01549A6NIU2 AC007751.1-201ENST00000529260 376 ntBASIC-1.16□□□□□ -2.6
LINC01549A6NIU2 AC021231.3-201ENST00000558497 370 ntBASIC-1.16□□□□□ -2.6
LINC01549A6NIU2 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-1.16□□□□□ -2.6
LINC01549A6NIU2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-1.17□□□□□ -2.6
LINC01549A6NIU2 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-1.17□□□□□ -2.6
LINC01549A6NIU2 MTCO2P7-201ENST00000446518 666 ntBASIC-1.17□□□□□ -2.6
LINC01549A6NIU2 RNU6-848P-201ENST00000515948 107 ntBASIC-1.17□□□□□ -2.6
LINC01549A6NIU2 RNU5F-2P-201ENST00000516066 82 ntBASIC-1.17□□□□□ -2.6
LINC01549A6NIU2 RNU4-49P-201ENST00000516080 140 ntBASIC-1.17□□□□□ -2.6
LINC01549A6NIU2 RNU6-617P-201ENST00000516147 107 ntBASIC-1.17□□□□□ -2.6
LINC01549A6NIU2 RNU6-473P-201ENST00000516164 107 ntBASIC-1.17□□□□□ -2.6
LINC01549A6NIU2 RNU6-1049P-201ENST00000516414 107 ntBASIC-1.17□□□□□ -2.6
LINC01549A6NIU2 SNORA31.10-201ENST00000516482 106 ntBASIC-1.17□□□□□ -2.6
LINC01549A6NIU2 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-1.17□□□□□ -2.6
LINC01549A6NIU2 AC242628.1-201ENST00000606810 391 ntBASIC-1.17□□□□□ -2.6
LINC01549A6NIU2 Pinc.1-201ENST00000616452 154 ntBASIC-1.17□□□□□ -2.6
LINC01549A6NIU2 SNORA32.2-201ENST00000384049 122 ntBASIC-1.18□□□□□ -2.6
LINC01549A6NIU2 SNORA12.2-201ENST00000391040 156 ntBASIC-1.18□□□□□ -2.6
LINC01549A6NIU2 MIR938-201ENST00000401216 83 ntBASIC-1.18□□□□□ -2.6
LINC01549A6NIU2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-1.18□□□□□ -2.6
LINC01549A6NIU2 AC087499.4-201ENST00000448505 178 ntBASIC-1.18□□□□□ -2.6
LINC01549A6NIU2 AC005042.3-201ENST00000453230 174 ntBASIC-1.18□□□□□ -2.6
LINC01549A6NIU2 AC104629.1-201ENST00000494226 508 ntBASIC-1.18□□□□□ -2.6
LINC01549A6NIU2 RNU6-572P-201ENST00000516724 80 ntBASIC-1.18□□□□□ -2.6
LINC01549A6NIU2 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-1.18□□□□□ -2.6
LINC01549A6NIU2 AC092656.1-203ENST00000624134 423 ntBASIC-1.18□□□□□ -2.6
LINC01549A6NIU2 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-1.18□□□□□ -2.6
LINC01549A6NIU2 AL590396.2-201ENST00000636511 1041 ntBASIC-1.18□□□□□ -2.6
LINC01549A6NIU2 RNA5SP257-201ENST00000363023 116 ntBASIC-1.19□□□□□ -2.6
LINC01549A6NIU2 RNU6-512P-201ENST00000364438 103 ntBASIC-1.19□□□□□ -2.6
LINC01549A6NIU2 RNU6-480P-201ENST00000384332 107 ntBASIC-1.19□□□□□ -2.6
LINC01549A6NIU2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
LINC01549A6NIU2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-1.19□□□□□ -2.6
LINC01549A6NIU2 AL353997.1-201ENST00000432936 108 ntBASIC-1.19□□□□□ -2.6
LINC01549A6NIU2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-1.19□□□□□ -2.6
LINC01549A6NIU2 TMEM251P1-201ENST00000503717 318 ntBASIC-1.19□□□□□ -2.6
LINC01549A6NIU2 OR8K2P-201ENST00000524645 927 ntBASIC-1.19□□□□□ -2.6
LINC01549A6NIU2 AL020997.3-201ENST00000602843 359 ntBASIC-1.19□□□□□ -2.6
LINC01549A6NIU2 AL159153.1-201ENST00000619688 317 ntBASIC-1.19□□□□□ -2.6
LINC01549A6NIU2 Y_RNA.549-201ENST00000384657 102 ntBASIC-1.2□□□□□ -2.6
LINC01549A6NIU2 SNORD111.1-201ENST00000516421 86 ntBASIC-1.2□□□□□ -2.6
LINC01549A6NIU2 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-1.2□□□□□ -2.6
LINC01549A6NIU2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-1.2□□□□□ -2.6
LINC01549A6NIU2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.2□□□□□ -2.6
LINC01549A6NIU2 MIR338-201ENST00000636369 67 ntBASIC-1.2□□□□□ -2.6
LINC01549A6NIU2 RNU6-161P-201ENST00000363051 106 ntBASIC-1.21□□□□□ -2.6
LINC01549A6NIU2 SNORD113.3-201ENST00000364630 78 ntBASIC-1.21□□□□□ -2.6
LINC01549A6NIU2 RNA5SP467-201ENST00000391274 118 ntBASIC-1.21□□□□□ -2.6
LINC01549A6NIU2 RNA5SP390-201ENST00000410191 113 ntBASIC-1.21□□□□□ -2.6
LINC01549A6NIU2 RNA5SP163-201ENST00000410304 99 ntBASIC-1.21□□□□□ -2.6
LINC01549A6NIU2 RPS26P42-201ENST00000413485 326 ntBASIC-1.21□□□□□ -2.6
LINC01549A6NIU2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-1.21□□□□□ -2.6
LINC01549A6NIU2 AC010531.2-201ENST00000465012 153 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms