Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 SNORD60.2-201ENST00000516883 86 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 RNU6-902P-201ENST00000517212 91 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 SUMO2P18-201ENST00000518873 252 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AC021231.3-201ENST00000558497 370 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AC080078.3-201ENST00000605407 463 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AC023510.2-201ENST00000622162 746 ntBASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.3□□□□□ -2.2
SMCO2A6NFE2 AC091812.1-201ENST00000432235 1948 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
SMCO2A6NFE2 SNORA63D-201ENST00000364359 132 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.29□□□□□ -2.2
SMCO2A6NFE2 RNU6-456P-201ENST00000384493 107 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 RNU6-903P-201ENST00000391270 109 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
SMCO2A6NFE2 AL117342.1-201ENST00000404861 406 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.29□□□□□ -2.2
SMCO2A6NFE2 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.29□□□□□ -2.2
SMCO2A6NFE2 MTCO2P11-201ENST00000431069 680 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 RPL31P3-201ENST00000458430 332 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 AC010531.2-201ENST00000465012 153 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 RPL31P58-201ENST00000469001 379 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 AK3P2-201ENST00000507976 429 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.29□□□□□ -2.2
SMCO2A6NFE2 RNU6-567P-201ENST00000516746 107 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.29□□□□□ -2.2
SMCO2A6NFE2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.29□□□□□ -2.2
SMCO2A6NFE2 MIR4760-201ENST00000585040 80 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 AC025449.1-201ENST00000603896 529 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 CTHRC1P1-201ENST00000605383 469 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 AC064807.4-201ENST00000607201 407 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 AL136221.1-201ENST00000621449 509 ntBASIC1.29□□□□□ -2.2
SMCO2A6NFE2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SMCO2A6NFE2 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SMCO2A6NFE2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.28□□□□□ -2.2
SMCO2A6NFE2 AL591704.2-201ENST00000421658 181 ntBASIC1.28□□□□□ -2.2
SMCO2A6NFE2 MTND4P32-201ENST00000437189 1237 ntBASIC1.28□□□□□ -2.2
SMCO2A6NFE2 HSPE1P9-201ENST00000440046 311 ntBASIC1.28□□□□□ -2.2
SMCO2A6NFE2 AL031274.1-201ENST00000450334 232 ntBASIC1.28□□□□□ -2.2
SMCO2A6NFE2 AC007395.1-201ENST00000451333 677 ntBASIC1.28□□□□□ -2.2
SMCO2A6NFE2 RPL9P9-202ENST00000466501 579 ntBASIC1.28□□□□□ -2.2
SMCO2A6NFE2 RPS26P55-201ENST00000471178 356 ntBASIC1.28□□□□□ -2.2
SMCO2A6NFE2 HMGN1P7-201ENST00000491722 313 ntBASIC1.28□□□□□ -2.2
SMCO2A6NFE2 RNA5SP437-201ENST00000517249 129 ntBASIC1.28□□□□□ -2.2
SMCO2A6NFE2 AC069113.1-201ENST00000517763 267 ntBASIC1.28□□□□□ -2.2
SMCO2A6NFE2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.28□□□□□ -2.2
SMCO2A6NFE2 HMGB1P33-201ENST00000563485 527 ntBASIC1.28□□□□□ -2.2
SMCO2A6NFE2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.28□□□□□ -2.2
SMCO2A6NFE2 MIR8063-201ENST00000621930 81 ntBASIC1.28□□□□□ -2.2
SMCO2A6NFE2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SMCO2A6NFE2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SMCO2A6NFE2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
SMCO2A6NFE2 RNU6-1120P-201ENST00000362988 108 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 Y_RNA.255-201ENST00000364581 97 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 SNORD1A-201ENST00000364968 72 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 MIR520A-201ENST00000384862 85 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
SMCO2A6NFE2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.27□□□□□ -2.21
SMCO2A6NFE2 MTCO2P3-201ENST00000442543 421 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 AC244505.5-201ENST00000443639 207 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.27□□□□□ -2.21
SMCO2A6NFE2 C1DP4-201ENST00000455429 424 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 RNU7-14P-201ENST00000459331 62 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 HMGN2P9-201ENST00000476875 229 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 RN7SKP179-201ENST00000516126 217 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 RNU6-856P-201ENST00000516959 98 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 AC016256.1-201ENST00000547971 354 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 AC090115.3-201ENST00000553218 849 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.27□□□□□ -2.21
SMCO2A6NFE2 AC109347.2-201ENST00000610220 349 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 AC083806.3-201ENST00000614016 455 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 AC005609.4-201ENST00000625071 447 ntBASIC1.27□□□□□ -2.21
SMCO2A6NFE2 AC010615.1-201ENST00000594254 1764 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.26□□□□□ -2.21
SMCO2A6NFE2 AL159152.1-201ENST00000635019 2587 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 RNY1P10-201ENST00000363268 113 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 Y_RNA.159-201ENST00000363674 87 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 RNU6-1019P-201ENST00000364424 107 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 SNORA36A-201ENST00000384221 132 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 MIR548B-201ENST00000385247 97 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.26□□□□□ -2.21
SMCO2A6NFE2 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.26□□□□□ -2.21
SMCO2A6NFE2 AC012306.1-201ENST00000423267 114 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.26□□□□□ -2.21
SMCO2A6NFE2 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.26□□□□□ -2.21
SMCO2A6NFE2 AC027119.1-201ENST00000440877 241 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.26□□□□□ -2.21
SMCO2A6NFE2 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.26□□□□□ -2.21
SMCO2A6NFE2 ATP5J2P3-201ENST00000451550 258 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 RNU7-180P-201ENST00000459240 63 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 AC079140.3-201ENST00000511111 550 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 AC067942.3-201ENST00000512025 362 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 RNU5F-4P-201ENST00000516581 114 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.26□□□□□ -2.21
SMCO2A6NFE2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.26□□□□□ -2.21
SMCO2A6NFE2 RRN3P3-201ENST00000549207 578 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 AC005668.1-201ENST00000571142 476 ntBASIC1.26□□□□□ -2.21
SMCO2A6NFE2 MIR4781-201ENST00000585250 76 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 194.5 ms