Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AC068137.4-201ENST00000638485 296 ntBASIC2.37□□□□□ -2.03
CCDC189A1A4V9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC189A1A4V9 AC062016.1-201ENST00000355719 319 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 Y_RNA.151-201ENST00000363566 112 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 RNU4-9P-201ENST00000364951 139 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 SNORD116-11-201ENST00000383882 92 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC189A1A4V9 NCOR1P3-201ENST00000420479 303 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 AL513185.2-201ENST00000425543 193 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 MTND4LP16-201ENST00000440828 295 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 AC074290.1-201ENST00000448883 135 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 MTND1P11-201ENST00000456661 876 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 AL049873.1-201ENST00000480540 376 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 RPL23AP75-201ENST00000491601 451 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 RNA5SP54-201ENST00000516951 92 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC189A1A4V9 AP002770.2-201ENST00000543613 532 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC189A1A4V9 MIR4753-201ENST00000585119 83 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 AC124303.1-201ENST00000605703 360 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 AC019193.3-201ENST00000609144 554 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 AC090617.10-201ENST00000624308 134 ntBASIC2.36□□□□□ -2.03
CCDC189A1A4V9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC189A1A4V9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC189A1A4V9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC189A1A4V9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CCDC189A1A4V9 MIR517A-201ENST00000385001 87 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 AL139415.2-201ENST00000431968 163 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC189A1A4V9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC189A1A4V9 UBE2V1P8-201ENST00000437166 265 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 AC004386.2-201ENST00000441858 148 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 MTCO1P44-201ENST00000441935 243 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 AC025750.2-201ENST00000442609 450 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 AC009237.7-201ENST00000447357 229 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 AP001486.1-201ENST00000463339 476 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 MTCYBP18-201ENST00000501056 747 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 RNU6-864P-201ENST00000516256 108 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC189A1A4V9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC189A1A4V9 MIR5006-201ENST00000583027 110 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 MIR5007-201ENST00000583098 95 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 AC016727.2-201ENST00000603988 621 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 AC103810.6-201ENST00000606708 136 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 AC139792.2-201ENST00000624218 587 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 AC006386.2-201ENST00000624491 75 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 AC012005.1-201ENST00000624575 75 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 MIR3662-201ENST00000637030 95 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 MTND5P9-201ENST00000503854 1755 ntBASIC2.35□□□□□ -2.03
CCDC189A1A4V9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CCDC189A1A4V9 BX322639.1-202ENST00000423987 2213 ntBASIC2.34□□□□□ -2.03
CCDC189A1A4V9 SNORD115-32-201ENST00000364079 82 ntBASIC2.34□□□□□ -2.03
CCDC189A1A4V9 RNA5SP138-201ENST00000365098 114 ntBASIC2.34□□□□□ -2.03
CCDC189A1A4V9 MIR196B-201ENST00000384852 84 ntBASIC2.34□□□□□ -2.03
CCDC189A1A4V9 MIR1283-1-201ENST00000408494 87 ntBASIC2.34□□□□□ -2.03
CCDC189A1A4V9 SNORA11.4-201ENST00000408823 129 ntBASIC2.34□□□□□ -2.03
CCDC189A1A4V9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.34□□□□□ -2.03
CCDC189A1A4V9 AC108938.1-201ENST00000451204 136 ntBASIC2.34□□□□□ -2.03
CCDC189A1A4V9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC189A1A4V9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC189A1A4V9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC189A1A4V9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC189A1A4V9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC189A1A4V9 AC067942.3-201ENST00000512025 362 ntBASIC2.34□□□□□ -2.03
CCDC189A1A4V9 SNORA44.1-201ENST00000517031 108 ntBASIC2.34□□□□□ -2.03
CCDC189A1A4V9 7SK.7-201ENST00000603504 247 ntBASIC2.34□□□□□ -2.03
CCDC189A1A4V9 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC189A1A4V9 AC093913.1-201ENST00000614178 329 ntBASIC2.34□□□□□ -2.03
CCDC189A1A4V9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC189A1A4V9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC189A1A4V9 AC100810.6-201ENST00000638068 285 ntBASIC2.34□□□□□ -2.03
CCDC189A1A4V9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC189A1A4V9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC189A1A4V9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC189A1A4V9 MIR340-201ENST00000362125 95 ntBASIC2.33□□□□□ -2.04
CCDC189A1A4V9 SNORD50.1-201ENST00000362987 71 ntBASIC2.33□□□□□ -2.04
CCDC189A1A4V9 RNA5SP37-201ENST00000365420 130 ntBASIC2.33□□□□□ -2.04
CCDC189A1A4V9 Y_RNA.500-201ENST00000384466 111 ntBASIC2.33□□□□□ -2.04
CCDC189A1A4V9 SNORA12.2-201ENST00000391040 156 ntBASIC2.33□□□□□ -2.04
CCDC189A1A4V9 SNORD115-47-201ENST00000391226 86 ntBASIC2.33□□□□□ -2.04
CCDC189A1A4V9 MIR1277-201ENST00000408536 78 ntBASIC2.33□□□□□ -2.04
CCDC189A1A4V9 AL513328.1-201ENST00000446460 224 ntBASIC2.33□□□□□ -2.04
CCDC189A1A4V9 AC079354.2-201ENST00000453523 154 ntBASIC2.33□□□□□ -2.04
CCDC189A1A4V9 RPS29P25-201ENST00000481709 171 ntBASIC2.33□□□□□ -2.04
CCDC189A1A4V9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.33□□□□□ -2.04
CCDC189A1A4V9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.33□□□□□ -2.04
CCDC189A1A4V9 EIF4BP1-201ENST00000554881 351 ntBASIC2.33□□□□□ -2.04
CCDC189A1A4V9 AC010900.2-201ENST00000604508 210 ntBASIC2.33□□□□□ -2.04
CCDC189A1A4V9 AC009318.2-201ENST00000610917 651 ntBASIC2.33□□□□□ -2.04
CCDC189A1A4V9 AC098657.3-201ENST00000620434 263 ntBASIC2.33□□□□□ -2.04
CCDC189A1A4V9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC189A1A4V9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CCDC189A1A4V9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CCDC189A1A4V9 SNORA5B-201ENST00000363786 132 ntBASIC2.32□□□□□ -2.04
CCDC189A1A4V9 SNORA80A-201ENST00000363922 136 ntBASIC2.32□□□□□ -2.04
CCDC189A1A4V9 RNU2-40P-201ENST00000410833 196 ntBASIC2.32□□□□□ -2.04
CCDC189A1A4V9 AL358453.1-201ENST00000422522 250 ntBASIC2.32□□□□□ -2.04
CCDC189A1A4V9 AL590632.1-201ENST00000424289 371 ntBASIC2.32□□□□□ -2.04
CCDC189A1A4V9 AC010531.2-201ENST00000465012 153 ntBASIC2.32□□□□□ -2.04
CCDC189A1A4V9 DEFB131C-201ENST00000528817 165 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms