Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 AC114491.1-201ENST00000416095 246 ntBASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 FABP5P4-201ENST00000437203 171 ntBASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 AL606517.2-201ENST00000442855 241 ntBASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 AC104982.1-201ENST00000478775 574 ntBASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 RNU6-947P-201ENST00000516264 106 ntBASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 SNORA31.10-201ENST00000516482 106 ntBASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 RNU6-201P-201ENST00000517100 61 ntBASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 AC073539.2-201ENST00000597113 165 ntBASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 Z83818.1-201ENST00000603584 150 ntBASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 AC012557.2-201ENST00000605919 418 ntBASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 AC097478.2-201ENST00000610572 514 ntBASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 MIR6516-201ENST00000630554 81 ntBASIC0.26□□□□□ -2.37
DUXBA0A1W2PPF3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 AC092268.1-201ENST00000342691 405 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 Y_RNA.465-201ENST00000384293 102 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 SNORD116-12-201ENST00000384468 92 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 HSFY7P-201ENST00000432672 318 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 HSFY8P-201ENST00000437934 318 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 AC112206.4-201ENST00000515142 405 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 Y_RNA.676-201ENST00000516393 96 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 AC007834.2-201ENST00000536310 343 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 MIR4307-201ENST00000582802 84 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 AL512605.2-201ENST00000592972 256 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 AL390123.1-201ENST00000603216 237 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 AC121334.2-201ENST00000605387 271 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 AL603839.4-201ENST00000624658 1005 ntBASIC0.25□□□□□ -2.37
DUXBA0A1W2PPF3 CASC19-280ENST00000642102 1351 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 U3.4-201ENST00000363352 213 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 SNORD32A-201ENST00000364805 84 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 SNORA75.2-201ENST00000391138 150 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 SNORA75.3-201ENST00000391231 150 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 MTCO2P12-201ENST00000427426 682 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 TIMM9P3-201ENST00000428659 274 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 AC000111.3-201ENST00000433478 193 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 AL133217.1-201ENST00000450980 425 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 AC233266.1-201ENST00000454518 96 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 SNRPGP9-201ENST00000456025 225 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 RNU7-90P-201ENST00000459216 62 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 RNU6-377P-201ENST00000515965 102 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 RNA5SP220-201ENST00000516298 104 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 RNU6-1003P-201ENST00000517099 105 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 AC024995.1-201ENST00000523014 93 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 MTATP6P15-201ENST00000527233 835 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 Z98751.3-201ENST00000604447 521 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 AC009994.1-201ENST00000606889 253 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 AL139022.2-201ENST00000606934 443 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 AC242852.1-201ENST00000612151 96 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 MIR6513-201ENST00000621188 64 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 AC243829.3-201ENST00000622177 108 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 AC244015.1-201ENST00000622301 99 ntBASIC0.24□□□□□ -2.37
DUXBA0A1W2PPF3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 RNU6-552P-201ENST00000362869 119 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 SNORD56.2-201ENST00000363242 71 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 RNU4-76P-201ENST00000364509 141 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 SNORD116-13-201ENST00000384408 92 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 MIR300-201ENST00000401138 83 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 MIR1283-1-201ENST00000408494 87 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 SNORD99-201ENST00000408612 74 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 RNU6-607P-201ENST00000411283 108 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 AC002486.1-201ENST00000435098 391 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 AL606662.1-201ENST00000445763 553 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 AL049830.1-201ENST00000468034 425 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 RBBP4P6-201ENST00000508098 202 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 RNA5SP134-201ENST00000516492 96 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 AC022616.6-201ENST00000520479 119 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 AL360219.1-201ENST00000610230 366 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 AC093913.1-201ENST00000614178 329 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 MIR6734-201ENST00000621166 68 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 AL513423.1-201ENST00000621695 132 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 AP000943.4-201ENST00000622912 357 ntBASIC0.23□□□□□ -2.37
DUXBA0A1W2PPF3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
DUXBA0A1W2PPF3 MTND4P5-201ENST00000435821 1374 ntBASIC0.22□□□□□ -2.37
DUXBA0A1W2PPF3 RNU1-133P-201ENST00000364867 167 ntBASIC0.22□□□□□ -2.37
DUXBA0A1W2PPF3 RNU6-336P-201ENST00000364891 107 ntBASIC0.22□□□□□ -2.37
DUXBA0A1W2PPF3 RNU6-16P-201ENST00000384385 107 ntBASIC0.22□□□□□ -2.37
DUXBA0A1W2PPF3 SNORA24.1-201ENST00000384401 135 ntBASIC0.22□□□□□ -2.37
DUXBA0A1W2PPF3 RNU6-417P-201ENST00000384712 107 ntBASIC0.22□□□□□ -2.37
DUXBA0A1W2PPF3 MIR653-201ENST00000385279 96 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms