Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 RNA5SP201-201ENST00000410316 124 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 RNU2-32P-201ENST00000411193 191 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 NCOR1P3-201ENST00000420479 303 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 EIF4EP2-201ENST00000422816 654 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 HMGB1P18-201ENST00000438801 619 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 AL513124.1-201ENST00000450410 614 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 HMGN1P12-201ENST00000499125 195 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC116337.1-201ENST00000509680 687 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC022616.8-201ENST00000533569 253 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC005858.4-201ENST00000623191 700 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 MTND4P1-201ENST00000457501 1466 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC233981.2-201ENST00000611524 1614 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 U3.9-201ENST00000363823 204 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 RNU6-593P-201ENST00000364716 112 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 RNU6-596P-201ENST00000365395 98 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 SNORA46.1-201ENST00000391069 153 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 MIR548F5-201ENST00000408421 86 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 MIR1294-201ENST00000408503 142 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 RNA5SP494-201ENST00000410653 129 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 PDCL2P1-201ENST00000419302 352 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 UBL5P3-201ENST00000475112 231 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 RN7SL429P-201ENST00000479090 223 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 RN7SL489P-201ENST00000486185 223 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 RN7SL327P-201ENST00000488659 223 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC018868.1-201ENST00000491307 315 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC021146.2-201ENST00000504736 556 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 CYCSP26-201ENST00000534107 320 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 MRPS36P4-201ENST00000534436 298 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 PCGEM1.1-201ENST00000613431 131 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC005520.5-201ENST00000613926 164 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 RN7SL853P-201ENST00000617250 223 ntBASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRBV5-4A0A0C4DH59 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 RNU6-1159P-201ENST00000362933 107 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 SNORD50.1-201ENST00000362987 71 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 Y_RNA.88-201ENST00000363029 99 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 RNU5B-2P-201ENST00000363036 113 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 SNORA72.1-201ENST00000363485 129 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 SNORD32B-201ENST00000364460 84 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 SNORD81.2-201ENST00000365153 76 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 Y_RNA.339-201ENST00000365325 102 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 RNU1-52P-201ENST00000384190 164 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 SUMO1P4-201ENST00000429430 302 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 RPS3AP52-201ENST00000435639 297 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 FTH1P25-201ENST00000447665 469 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 SNORD5.1-201ENST00000458800 75 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC132942.1-201ENST00000486753 483 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC068781.1-201ENST00000488231 618 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC079804.2-201ENST00000490376 200 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC103851.1-201ENST00000506833 274 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 MIR4273-201ENST00000582824 84 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC009318.2-201ENST00000610917 651 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 AL355073.2-201ENST00000612106 557 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC137590.2-201ENST00000619709 240 ntBASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.88□□□□□ -2.11
TRBV5-4A0A0C4DH59 MTND5P9-201ENST00000503854 1755 ntBASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 Y_RNA.184-201ENST00000363884 108 ntBASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 RNU6-378P-201ENST00000384324 107 ntBASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 Y_RNA.482-201ENST00000384377 111 ntBASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 SNORA51.11-201ENST00000384442 131 ntBASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 RNU1-148P-201ENST00000384472 162 ntBASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 MIR208B-201ENST00000401172 77 ntBASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 RPL37P10-201ENST00000412884 288 ntBASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 USP9YP30-201ENST00000430729 455 ntBASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC079354.2-201ENST00000453523 154 ntBASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 AL139109.1-201ENST00000455491 297 ntBASIC1.87□□□□□ -2.11
TRBV5-4A0A0C4DH59 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms