Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 RNU6-467P-201ENST00000517027 110 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 AL121579.1-201ENST00000555129 305 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 ZNF519P3-201ENST00000557158 1032 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 TPRKBP2-201ENST00000565969 475 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 SNORA59B-202ENST00000578183 701 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 MIR4714-201ENST00000580728 77 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 AL513534.2-201ENST00000603836 250 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 AC097478.2-201ENST00000610572 514 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 AC121333.1-201ENST00000567488 2709 ntBASIC0.44□□□□□ -2.34
TRAV3A0A0B4J244 AL391994.1-201ENST00000254724 282 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 Y_RNA.22-201ENST00000362492 102 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-37P-201ENST00000362692 107 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 Y_RNA.124-201ENST00000363339 93 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-11P-201ENST00000364234 107 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-342P-201ENST00000384521 104 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-910P-201ENST00000390844 107 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 RNU2-39P-201ENST00000410604 198 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 AC000111.3-201ENST00000433478 193 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 RPS24P1-201ENST00000438550 371 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 AC245047.7-201ENST00000440265 293 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 AC112206.4-201ENST00000515142 405 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 AC024995.1-201ENST00000523014 93 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 AC023050.3-201ENST00000541142 333 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 AC021231.3-201ENST00000558497 370 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 MIR6513-201ENST00000621188 64 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 AC068700.1-201ENST00000565862 3754 ntBASIC0.43□□□□□ -2.34
TRAV3A0A0B4J244 Y_RNA.132-201ENST00000363421 102 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 RNA5SP499-201ENST00000363982 119 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-336P-201ENST00000364891 107 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 Y_RNA.302-201ENST00000364997 102 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 Y_RNA.363-201ENST00000365529 113 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-877P-201ENST00000383868 107 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-110P-201ENST00000384508 104 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-950P-201ENST00000384651 107 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 MIR300-201ENST00000401138 83 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 MTCYBP36-201ENST00000404146 440 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-757P-201ENST00000410334 100 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-733P-201ENST00000410759 104 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 C1DP2-201ENST00000418167 426 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 AC002486.1-201ENST00000435098 391 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 RPL37P21-201ENST00000435890 276 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 C1DP4-201ENST00000455429 424 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 AC092991.1-201ENST00000477176 376 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 COX6CP6-201ENST00000490840 228 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 RPS23P5-201ENST00000495419 428 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 HMGN1P12-201ENST00000499125 195 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-377P-201ENST00000515965 102 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 AP001893.2-201ENST00000526949 202 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 MIR5695-201ENST00000579717 85 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 BNIP3P40-201ENST00000596017 556 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 AC078795.3-201ENST00000602913 472 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 AL390123.1-201ENST00000603216 237 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 AL158042.1-201ENST00000605338 460 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 AC064807.4-201ENST00000607201 407 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.42□□□□□ -2.34
TRAV3A0A0B4J244 Y_RNA.36-201ENST00000362602 112 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-562P-201ENST00000362731 107 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 snoU2-30.2-201ENST00000362805 70 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 Y_RNA.324-201ENST00000365165 102 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-969P-201ENST00000383900 105 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-1026P-201ENST00000384465 108 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-1105P-201ENST00000384774 107 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 RNU6-1000P-201ENST00000391066 106 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AF228730.1-201ENST00000397972 663 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AC011233.1-201ENST00000422812 283 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 HSFY7P-201ENST00000432672 318 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 HSFY8P-201ENST00000437934 318 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AC048334.1-201ENST00000477975 159 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 RPS27P22-201ENST00000478056 241 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AC098869.1-201ENST00000481627 292 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 RPS26P48-201ENST00000491713 339 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AC092436.3-201ENST00000511788 257 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 AC104136.1-201ENST00000512969 394 ntBASIC0.41□□□□□ -2.34
TRAV3A0A0B4J244 RNA5SP255-201ENST00000516370 107 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms