Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 snoU2_19.1-201ENST00000362361 80 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 RNA5SP197-201ENST00000363357 119 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 Y_RNA.257-201ENST00000364596 102 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 SNORA20.1-201ENST00000364790 130 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 Y_RNA.541-201ENST00000384640 113 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 Y_RNA.570-201ENST00000384750 101 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 MIR29B2-201ENST00000385055 81 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 MIR549A-201ENST00000385268 96 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 Y_RNA.602-201ENST00000410535 92 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 ARL5AP4-201ENST00000430731 512 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 SEM1P1-201ENST00000506694 209 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 RNU6-344P-201ENST00000516635 111 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 AC023632.4-201ENST00000517783 191 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 AC107934.2-201ENST00000518653 310 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 AL670379.2-201ENST00000604983 252 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 AC011373.1-201ENST00000607270 237 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 AL034408.1-202ENST00000636088 415 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 AC010329.5-201ENST00000623497 2174 ntBASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 RNU6-290P-201ENST00000365212 101 ntBASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 AC092017.2-201ENST00000427600 362 ntBASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 IFNA11P-201ENST00000446352 526 ntBASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 UQCRBP2-201ENST00000447827 297 ntBASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 MTND4LP30-201ENST00000454092 297 ntBASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 HSPE1P25-201ENST00000455484 251 ntBASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 SNORA64.4-201ENST00000516632 81 ntBASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 DEFB108E-201ENST00000524692 240 ntBASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 AC018448.1-201ENST00000552843 316 ntBASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 AC141273.2-201ENST00000618989 130 ntBASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 AC127459.3-201ENST00000624328 466 ntBASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 AC012442.3-202ENST00000636742 206 ntBASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.28□□□□□ -1.88
PCDHA9Q9Y5H5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 Y_RNA.20-201ENST00000362479 113 ntBASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 Y_RNA.352-201ENST00000365439 102 ntBASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 Y_RNA.416-201ENST00000384014 113 ntBASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 Y_RNA.498-201ENST00000384460 102 ntBASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 MIR134-201ENST00000385258 73 ntBASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 AC126124.2-201ENST00000413542 321 ntBASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 AC027124.2-201ENST00000428249 105 ntBASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 RPS27P29-201ENST00000463110 252 ntBASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 RPL23AP67-201ENST00000465341 474 ntBASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 RRN3P3-201ENST00000549207 578 ntBASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 AC005176.2-201ENST00000596933 147 ntBASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHA9Q9Y5H5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 AC110774.1-201ENST00000623567 2018 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 RNA5SP383-201ENST00000362934 120 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 SNORD56.3-201ENST00000363507 71 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 RNU6-1310P-201ENST00000384153 107 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 RNU6-21P-201ENST00000384710 107 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 ELOCP21-201ENST00000412558 336 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 AC004386.2-201ENST00000441858 148 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 AC009237.7-201ENST00000447357 229 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 RBMY2UP-201ENST00000453474 324 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 RNU6-625P-201ENST00000459412 107 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 AC107222.1-201ENST00000510899 637 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 AC108043.1-201ENST00000512696 574 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 RNU7-110P-201ENST00000516891 62 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 AC026403.1-201ENST00000518938 295 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 AC068657.1-201ENST00000520807 306 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 AC093331.1-201ENST00000521474 169 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 AC034105.4-201ENST00000568304 277 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 AC099778.2-201ENST00000610904 211 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 AC073476.4-201ENST00000628409 72 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 MIR7157-201ENST00000635801 60 ntBASIC3.26□□□□□ -1.89
PCDHA9Q9Y5H5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms