Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 RNU6-72P-201ENST00000384285 79 ntBASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 RNU6-929P-201ENST00000384429 107 ntBASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 SNORA12.1-201ENST00000390873 148 ntBASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 MIR1197-201ENST00000408818 88 ntBASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 MTND1P20-201ENST00000430341 950 ntBASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 MTATP6P16-201ENST00000434543 526 ntBASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 AL606517.2-201ENST00000442855 241 ntBASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 snoU109.2-201ENST00000459316 135 ntBASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 RBBP4P6-201ENST00000508098 202 ntBASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 AC112187.2-201ENST00000604345 283 ntBASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 AL096861.1-201ENST00000610899 123 ntBASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 AL512643.1-201ENST00000635735 524 ntBASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 AC132825.7-201ENST00000638744 335 ntBASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 RNU6-756P-201ENST00000383997 107 ntBASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 SNORA75B-201ENST00000384053 137 ntBASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 MIR573-201ENST00000384964 99 ntBASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 RNU6-1025P-201ENST00000410629 104 ntBASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 RNU6-917P-201ENST00000516294 104 ntBASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 AL133153.1-201ENST00000557756 303 ntBASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 SNORA25.18-201ENST00000607153 114 ntBASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 AC015726.2-201ENST00000620112 122 ntBASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.49□□□□□ -2.49
AP4S1Q9Y587 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 SNORD115-48-201ENST00000364764 76 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 SNORD31B-201ENST00000364977 69 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 MIR301A-201ENST00000385261 86 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 RNA5SP323-201ENST00000391094 133 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 AL079342.2-201ENST00000403367 482 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 MIR1827-201ENST00000408549 66 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 AL365338.1-201ENST00000422282 858 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 AL606489.2-201ENST00000433886 234 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 AL133217.1-201ENST00000450980 425 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 AC007395.1-201ENST00000451333 677 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 MTND2P6-201ENST00000455337 1030 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 SNORA40.12-201ENST00000516329 111 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 AF235103.2-201ENST00000525753 346 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 AC138915.2-201ENST00000569776 97 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 AL354696.1-201ENST00000614652 497 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 AL357075.2-201ENST00000614906 189 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 AL513423.1-201ENST00000621695 132 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 AC097372.5-201ENST00000623665 376 ntBASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.5□□□□□ -2.49
AP4S1Q9Y587 SNORD118-201ENST00000363593 134 ntBASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 RNU6-716P-201ENST00000365621 103 ntBASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 MIR214-201ENST00000385214 110 ntBASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 AL451046.2-201ENST00000403074 277 ntBASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 SNORD71-201ENST00000411292 86 ntBASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 AL139396.1-201ENST00000421137 167 ntBASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 MTCO1P3-201ENST00000429327 192 ntBASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 AC010469.2-201ENST00000496412 480 ntBASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 RNU1-117P-201ENST00000517041 158 ntBASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 AL034555.1-201ENST00000604816 211 ntBASIC-0.51□□□□□ -2.49
AP4S1Q9Y587 RNU6-353P-201ENST00000364266 108 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 MIR593-201ENST00000384856 100 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 SNORD83.1-201ENST00000411362 77 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 MTND4P24-201ENST00000424002 397 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 AL353777.1-201ENST00000425552 326 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 AL591704.1-201ENST00000432574 275 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 MTND4P25-201ENST00000441039 533 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 ELOCP24-201ENST00000456370 334 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 AC091874.1-201ENST00000511402 339 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 RNU6-320P-201ENST00000516511 106 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 AC022868.1-201ENST00000517767 391 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 AC021231.3-201ENST00000558497 370 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 MIR4778-201ENST00000577635 80 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 AC004832.4-201ENST00000608952 331 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 AC138749.5-201ENST00000611461 208 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 SEPT14P17-201ENST00000617978 177 ntBASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.52□□□□□ -2.49
AP4S1Q9Y587 SNORA4.3-201ENST00000365564 137 ntBASIC-0.53□□□□□ -2.49
AP4S1Q9Y587 MIR660-201ENST00000385235 97 ntBASIC-0.53□□□□□ -2.49
AP4S1Q9Y587 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms