Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 GAPDHP17-201ENST00000449858 1001 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 AC091951.3-201ENST00000504093 246 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 AC116562.3-201ENST00000506136 177 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 AC011406.1-201ENST00000512440 370 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 RNA5SP384-201ENST00000516615 116 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 AC068587.5-201ENST00000528506 175 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 CYP4A27P-201ENST00000567218 190 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 MIR4742-201ENST00000581069 85 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 AC136443.5-201ENST00000603741 370 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 AL031281.1-201ENST00000604049 488 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 AC064872.1-201ENST00000604823 1072 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 AC009994.1-201ENST00000606889 253 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 AC005520.5-201ENST00000613926 164 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 MIR8070-201ENST00000616510 88 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 AC138649.3-201ENST00000622154 254 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 AC068647.2-201ENST00000637380 353 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 MIR373-201ENST00000362273 69 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-1123P-201ENST00000362347 106 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 Y_RNA.132-201ENST00000363421 102 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 RNU1-36P-201ENST00000365130 165 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-877P-201ENST00000383868 107 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-116P-201ENST00000384042 109 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 MIR19B1-201ENST00000384829 87 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 AL606662.1-201ENST00000445763 553 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 RPS26P45-201ENST00000471748 340 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 RPS23P5-201ENST00000495419 428 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-165P-201ENST00000517170 99 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 PCMTD1P2-201ENST00000565017 355 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 AC109446.2-201ENST00000567872 497 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 MIR4661-201ENST00000582720 75 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 Z98751.3-201ENST00000604447 521 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 AC108706.1-201ENST00000611053 297 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 MIR6504-201ENST00000613520 61 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 AC009878.1-201ENST00000621819 340 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 MIR338-201ENST00000636369 67 ntBASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-552P-201ENST00000362869 119 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 RNU6-501P-201ENST00000364072 100 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 AL355143.1-201ENST00000407101 841 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 AC004941.2-201ENST00000427009 228 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 AL365184.2-201ENST00000431139 435 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 AC002486.1-201ENST00000435098 391 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 GTF2IP13-201ENST00000438487 386 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 AL163973.1-201ENST00000484753 577 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 AC016632.1-201ENST00000503994 196 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 SCARNA24.1-201ENST00000516465 137 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 RNU6-1220P-201ENST00000517126 108 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 MTND5P17-201ENST00000418405 1603 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 OR4G1P-203ENST00000641984 1631 ntBASIC0.71□□□□□ -2.3
HDGFL3Q9Y3E1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 Y_RNA.164-201ENST00000363709 102 ntBASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 RNU6-1303P-201ENST00000364841 107 ntBASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 RNU6-715P-201ENST00000365204 103 ntBASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 RNA5SP259-201ENST00000365541 109 ntBASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 AL117339.3-201ENST00000418733 162 ntBASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 AC103851.1-201ENST00000506833 274 ntBASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 RNU2-34P-201ENST00000516534 121 ntBASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 RNU6-567P-201ENST00000516746 107 ntBASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 MTND4P33-201ENST00000556706 766 ntBASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 TMF1P1-201ENST00000576058 373 ntBASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 AC099654.13-201ENST00000639774 207 ntBASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 BX322639.1-202ENST00000423987 2213 ntBASIC0.7□□□□□ -2.3
HDGFL3Q9Y3E1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
HDGFL3Q9Y3E1 SNORA72.2-201ENST00000365028 127 ntBASIC0.69□□□□□ -2.3
HDGFL3Q9Y3E1 SNORA25.9-201ENST00000365087 128 ntBASIC0.69□□□□□ -2.3
HDGFL3Q9Y3E1 RNU6-169P-201ENST00000365336 107 ntBASIC0.69□□□□□ -2.3
HDGFL3Q9Y3E1 RNU6-418P-201ENST00000384035 107 ntBASIC0.69□□□□□ -2.3
HDGFL3Q9Y3E1 RNU6-550P-201ENST00000391057 101 ntBASIC0.69□□□□□ -2.3
HDGFL3Q9Y3E1 AC010099.3-201ENST00000423896 409 ntBASIC0.69□□□□□ -2.3
HDGFL3Q9Y3E1 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms