Protein–RNA interactions for Protein: Q9UBZ4

APEX2, DNA-(apurinic or apyrimidinic site) lyase 2, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX2Q9UBZ4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.56□□□□□ -1.84
APEX2Q9UBZ4 RNU7-110P-201ENST00000516891 62 ntBASIC3.56□□□□□ -1.84
APEX2Q9UBZ4 AC104027.1-201ENST00000521887 300 ntBASIC3.56□□□□□ -1.84
APEX2Q9UBZ4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.56□□□□□ -1.84
APEX2Q9UBZ4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.56□□□□□ -1.84
APEX2Q9UBZ4 AC026470.2-201ENST00000561492 181 ntBASIC3.56□□□□□ -1.84
APEX2Q9UBZ4 AC233702.2-202ENST00000562547 291 ntBASIC3.56□□□□□ -1.84
APEX2Q9UBZ4 AC099778.2-201ENST00000610904 211 ntBASIC3.56□□□□□ -1.84
APEX2Q9UBZ4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.56□□□□□ -1.84
APEX2Q9UBZ4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
APEX2Q9UBZ4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
APEX2Q9UBZ4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
APEX2Q9UBZ4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
APEX2Q9UBZ4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
APEX2Q9UBZ4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 AL109809.4-201ENST00000603520 2185 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 AL049781.1-201ENST00000623195 3585 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 RNU1-62P-201ENST00000362599 164 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 Y_RNA.54-201ENST00000362766 105 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 RNU6-626P-201ENST00000363354 107 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 RNU6-529P-201ENST00000363383 104 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 RNU6-1210P-201ENST00000363775 107 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 RNU6-338P-201ENST00000383888 105 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 RNU6-20P-201ENST00000384106 107 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 CBX3P9-201ENST00000402326 552 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 AIMP1P2-201ENST00000425294 312 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 SETP5-201ENST00000437270 562 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 AC010095.1-201ENST00000443543 144 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 AP001324.2-201ENST00000461163 319 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 AC027176.1-201ENST00000560204 514 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 MIR4276-201ENST00000584832 70 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 AL137843.1-201ENST00000605078 385 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 AC012314.7-201ENST00000619693 93 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 MTND5P35-201ENST00000557537 1720 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 AC099654.7-201ENST00000635788 2127 ntBASIC3.55□□□□□ -1.84
APEX2Q9UBZ4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 Y_RNA.40-201ENST00000362645 93 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 RNU6-655P-201ENST00000362858 107 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 RNU6-799P-201ENST00000363567 107 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 RNA5SP50-201ENST00000363731 107 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 RNU1-57P-201ENST00000384491 166 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 MIR490-201ENST00000384865 128 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 MIR186-201ENST00000384988 86 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 RNA5SP201-201ENST00000410316 124 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 UQCRBP2-201ENST00000447827 297 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 AL139109.1-201ENST00000455491 297 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 RNU2-31P-201ENST00000516954 155 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 SCARNA24.2-201ENST00000516968 130 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 RNU6-711P-201ENST00000517255 106 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 AC079598.5-201ENST00000547460 117 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 AC005176.2-201ENST00000596933 147 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 AC010900.2-201ENST00000604508 210 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
APEX2Q9UBZ4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 AC026241.1-201ENST00000517873 2142 ntBASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 SNORA14A-201ENST00000364773 135 ntBASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 SNORA18.3-201ENST00000384122 132 ntBASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 Y_RNA.785-201ENST00000384290 109 ntBASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 MIR491-201ENST00000384877 84 ntBASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 RPL23AP36-201ENST00000413895 458 ntBASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 RNU6-138P-201ENST00000515952 107 ntBASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 SNORA70.24-201ENST00000517233 118 ntBASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 AC093331.1-201ENST00000521474 169 ntBASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 AC098479.1-201ENST00000609225 154 ntBASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 PCGEM1.1-201ENST00000613431 131 ntBASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.53□□□□□ -1.84
APEX2Q9UBZ4 MIR7153-201ENST00000637758 57 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms