Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RNU6-626P-201ENST00000363354 107 ntBASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 RNA5SP197-201ENST00000363357 119 ntBASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 RNU6-961P-201ENST00000363893 105 ntBASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 RNU6-20P-201ENST00000384106 107 ntBASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 AL603910.2-201ENST00000407268 136 ntBASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 AC008155.2-201ENST00000464337 397 ntBASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 RPL23AP67-201ENST00000465341 474 ntBASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 RNU7-110P-201ENST00000516891 62 ntBASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 AC011373.1-201ENST00000607270 237 ntBASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KCMF1Q9P0J7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 AC017071.1-201ENST00000564407 2204 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 Y_RNA.20-201ENST00000362479 113 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 RNU4-90P-201ENST00000362773 141 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 RNU1-105P-201ENST00000363470 161 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 RNU6-799P-201ENST00000363567 107 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 Y_RNA.179-201ENST00000363844 90 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 RNU1-33P-201ENST00000364249 162 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 RNU6-290P-201ENST00000365212 101 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 RNU6-338P-201ENST00000383888 105 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 Y_RNA.462-201ENST00000384268 102 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 RNU6-378P-201ENST00000384324 107 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 MIR186-201ENST00000384988 86 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 SNORA11.1-201ENST00000408133 129 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 Y_RNA.595-201ENST00000410403 105 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 RNU5A-5P-201ENST00000411054 116 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 AIMP1P2-201ENST00000425294 312 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 HSPE1P25-201ENST00000455484 251 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 AL139109.1-201ENST00000455491 297 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 snoU13.14-201ENST00000459372 104 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 AC073901.1-201ENST00000462471 408 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 AC007215.1-201ENST00000464893 276 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 RPL36AP48-201ENST00000485521 314 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 RPS23P5-201ENST00000495419 428 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 Y_RNA.683-201ENST00000516508 93 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 AC093331.1-201ENST00000521474 169 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 RRN3P3-201ENST00000549207 578 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 MZT1P2-201ENST00000604387 248 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 AC096577.2-201ENST00000611455 153 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 MAPK10-362ENST00000641864 4484 ntBASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.18□□□□□ -1.9
KCMF1Q9P0J7 BX322639.1-202ENST00000423987 2213 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 MTND5P35-201ENST00000557537 1720 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 RNU5F-3P-201ENST00000363767 117 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 Y_RNA.277-201ENST00000364754 102 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 SNORA14A-201ENST00000364773 135 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 Y_RNA.286-201ENST00000364813 102 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 Y_RNA.352-201ENST00000365439 102 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 Y_RNA.539-201ENST00000384635 107 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 RNU6-21P-201ENST00000384710 107 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 RNA5SP354-201ENST00000391247 136 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 AC126124.2-201ENST00000413542 321 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 CENPBD1P1-201ENST00000464061 469 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 AC117440.1-201ENST00000474107 571 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 AC103975.1-201ENST00000482506 483 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 RPS27P26-201ENST00000494583 239 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 SEPT14P8-201ENST00000508026 178 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 AC107934.2-201ENST00000518653 310 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 SNORD113-5-201ENST00000607261 78 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 AC005520.5-201ENST00000613926 164 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 AC103988.1-201ENST00000566382 2177 ntBASIC3.17□□□□□ -1.9
KCMF1Q9P0J7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 RNU6-1266P-201ENST00000362794 105 ntBASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 Y_RNA.65-201ENST00000362846 100 ntBASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 RNU6-655P-201ENST00000362858 107 ntBASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 RNA5SP267-201ENST00000364893 126 ntBASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 AC009310.1-201ENST00000414414 451 ntBASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 Z98742.2-201ENST00000431564 187 ntBASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 RPL23AP70-201ENST00000483361 460 ntBASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 MIR4423-201ENST00000580922 80 ntBASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KCMF1Q9P0J7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
KCMF1Q9P0J7 RNU4-15P-201ENST00000362613 141 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms