Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.11□□□□□ -2.07
NDE1Q9NXR1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.11□□□□□ -2.07
NDE1Q9NXR1 VN1R107P-201ENST00000601784 209 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 AC073410.2-201ENST00000603240 332 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 AP000654.2-201ENST00000605633 586 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 RNU6-91P-201ENST00000607774 107 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 MIR8076-201ENST00000611401 83 ntBASIC2.11□□□□□ -2.07
NDE1Q9NXR1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.2-201ENST00000362330 96 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 RNU4-79P-201ENST00000362764 141 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 SNORD50.1-201ENST00000362987 71 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 RNU6-1188P-201ENST00000363795 107 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.259-201ENST00000364619 101 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.419-201ENST00000384041 102 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 RNU6-1297P-201ENST00000384415 104 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 RNU6-1222P-201ENST00000384615 107 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 MIR186-201ENST00000384988 86 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 RNU2-23P-201ENST00000410545 195 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.646-201ENST00000410980 101 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 AC097463.2-201ENST00000421074 142 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 AC008267.5-201ENST00000424928 265 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 MTCO3P10-201ENST00000455912 772 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 AC140059.1-201ENST00000489238 361 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.1□□□□□ -2.07
NDE1Q9NXR1 RNU6-120P-201ENST00000516077 103 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 SNORA31.16-201ENST00000516773 139 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.708-201ENST00000516950 96 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.1□□□□□ -2.07
NDE1Q9NXR1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.1□□□□□ -2.07
NDE1Q9NXR1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.1□□□□□ -2.07
NDE1Q9NXR1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.1□□□□□ -2.07
NDE1Q9NXR1 MRPS36P4-201ENST00000534436 298 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.1□□□□□ -2.07
NDE1Q9NXR1 MIR3616-201ENST00000584070 92 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 AC002984.1-201ENST00000591692 448 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 AC078795.3-201ENST00000602913 472 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.1□□□□□ -2.07
NDE1Q9NXR1 AC096772.1-201ENST00000609146 564 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 AL359314.1-201ENST00000616913 261 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 uc_338.20-201ENST00000621563 178 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 SNORA43.4-201ENST00000629559 138 ntBASIC2.1□□□□□ -2.07
NDE1Q9NXR1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.1□□□□□ -2.07
NDE1Q9NXR1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
NDE1Q9NXR1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
NDE1Q9NXR1 RNU6-1010P-201ENST00000362757 107 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.533-201ENST00000384596 114 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 RNU6-310P-201ENST00000384655 107 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 RNY4P36-201ENST00000391116 96 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 RNU2-40P-201ENST00000410833 196 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 RNA5SP508-201ENST00000411327 119 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.09□□□□□ -2.07
NDE1Q9NXR1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.09□□□□□ -2.07
NDE1Q9NXR1 BX276092.3-201ENST00000424182 230 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 RPL30P15-201ENST00000457129 321 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 AC008413.1-201ENST00000511864 177 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 RNA5SP112-201ENST00000515937 99 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 SCARNA16.2-201ENST00000516520 172 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 Y_RNA.718-201ENST00000517110 102 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.09□□□□□ -2.07
NDE1Q9NXR1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.09□□□□□ -2.07
NDE1Q9NXR1 ANP32BP3-201ENST00000559213 706 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.09□□□□□ -2.07
NDE1Q9NXR1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.09□□□□□ -2.07
NDE1Q9NXR1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.09□□□□□ -2.07
NDE1Q9NXR1 MIR3935-201ENST00000583472 104 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 AL158827.2-201ENST00000602494 330 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 AC018889.1-201ENST00000605372 397 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 AC084781.2-201ENST00000615568 161 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 PISRT1.1-201ENST00000616930 107 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 AL159153.1-201ENST00000619688 317 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 AL691447.3-201ENST00000635020 330 ntBASIC2.09□□□□□ -2.07
NDE1Q9NXR1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
NDE1Q9NXR1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AC006026.1-201ENST00000444025 1803 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 RNU1-72P-201ENST00000362976 153 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 RNU6-1285P-201ENST00000363480 105 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 RNU6-1141P-201ENST00000364520 107 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 RNU6-593P-201ENST00000364716 112 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 RNU6-1032P-201ENST00000384100 107 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 RNU1-57P-201ENST00000384491 166 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 MTCYBP4-201ENST00000401524 249 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 RNU2-52P-201ENST00000410680 190 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 EIF4EP4-201ENST00000424916 578 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AIMP1P2-201ENST00000425294 312 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 RPL23AP95-201ENST00000426806 265 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AL353997.1-201ENST00000432936 108 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AC244670.1-201ENST00000436879 112 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AC018634.1-201ENST00000437554 401 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 GPM6BP3-201ENST00000442797 145 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.08□□□□□ -2.08
NDE1Q9NXR1 SNORD19B-201ENST00000459623 84 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AL121594.1-201ENST00000475906 575 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 RPL30P1-201ENST00000488676 339 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 RPL22P13-201ENST00000493291 347 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 AC114801.2-201ENST00000503825 781 ntBASIC2.08□□□□□ -2.08
NDE1Q9NXR1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms