Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 HMGN2P31-201ENST00000432430 273 ntBASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 POLR2KP2-201ENST00000438155 177 ntBASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 AC007395.1-201ENST00000451333 677 ntBASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 RBMY2UP-201ENST00000453474 324 ntBASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 AP001324.2-201ENST00000461163 319 ntBASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 RPL30P12-201ENST00000474666 353 ntBASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 SNORA31.16-201ENST00000516773 139 ntBASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 AC026333.2-201ENST00000542164 106 ntBASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 AC005176.2-201ENST00000596933 147 ntBASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 AL133393.1-201ENST00000603277 287 ntBASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 AL359198.2-201ENST00000611836 194 ntBASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 MIR6075-201ENST00000620782 95 ntBASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PARPBPQ9NWS1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 RNU6-50P-201ENST00000362356 103 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 Y_RNA.101-201ENST00000363154 102 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 RNU6-1280P-201ENST00000365211 107 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 RNU6-805P-201ENST00000365643 106 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 MIR7-3-201ENST00000384898 110 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 RNU1-101P-201ENST00000391171 127 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 AL358075.3-201ENST00000426289 226 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 RPL37P4-201ENST00000448908 268 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 AC084357.1-201ENST00000473404 255 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 RNU1-61P-201ENST00000516107 151 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 AC107294.3-201ENST00000609211 526 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 AC019176.2-201ENST00000611579 315 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 AC084757.4-201ENST00000616350 526 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 MIR3529-201ENST00000637713 78 ntBASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PARPBPQ9NWS1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 AC103988.1-201ENST00000566382 2177 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 RNA5SP197-201ENST00000363357 119 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 RNU6-1285P-201ENST00000363480 105 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 SNORD115-8-201ENST00000363856 82 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 RNU6-704P-201ENST00000364162 103 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 Y_RNA.217-201ENST00000364214 105 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 RNU6-1141P-201ENST00000364520 107 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 SNORD115-38-201ENST00000365037 82 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 RNY1P5-201ENST00000383890 115 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 RNA5SP293-201ENST00000410527 113 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 AC024067.1-201ENST00000426199 223 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 CYCSP35-201ENST00000451978 304 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 Y_RNA.641-201ENST00000459414 105 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 AC091179.1-201ENST00000461606 579 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 AC016632.1-201ENST00000503994 196 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 FCF1P8-201ENST00000510322 597 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 AC074133.1-201ENST00000515696 183 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 SNORA70.18-201ENST00000516696 98 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 AC011602.1-201ENST00000546484 331 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 AC022441.3-201ENST00000605737 136 ntBASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.08□□□□□ -1.92
PARPBPQ9NWS1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 RNA5SP119-201ENST00000362715 117 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 RNU4-80P-201ENST00000363200 141 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 Y_RNA.230-201ENST00000364348 109 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 MIR613-201ENST00000385248 95 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 MIR888-201ENST00000401186 77 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 Y_RNA.597-201ENST00000410463 100 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 RN7SKP61-201ENST00000410642 295 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 RNU5E-9P-201ENST00000411164 104 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 OOSP1P1-201ENST00000423265 274 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 AC244670.1-201ENST00000436879 112 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 AC010401.1-201ENST00000463867 348 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 RN7SL442P-201ENST00000473804 320 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 RNA5SP468-201ENST00000516782 93 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 RNA5SP380-201ENST00000517190 98 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 AP002001.1-203ENST00000534002 267 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 AC016256.1-201ENST00000547971 354 ntBASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.07□□□□□ -1.92
PARPBPQ9NWS1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms