Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MFSD8-242ENST00000641690 4199 ntBASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CUEDC1Q9NWM3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 Z82209.1-201ENST00000422141 2135 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 AC010733.2-201ENST00000589496 5702 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 RNU1-105P-201ENST00000363470 161 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 AP002088.1-201ENST00000382740 395 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 RNU1-44P-201ENST00000384453 163 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 Y_RNA.558-201ENST00000384685 113 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 AL603914.1-201ENST00000401964 204 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 MLLT10P1-201ENST00000418346 262 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 AL356387.2-201ENST00000422272 243 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 Z75741.1-201ENST00000446793 314 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 Y_RNA.649-201ENST00000459077 103 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 RPS26P45-201ENST00000471748 340 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 RNA5SP154-201ENST00000516193 111 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 RNU6-412P-201ENST00000516434 106 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 RNU6-638P-201ENST00000516582 104 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 MRPL49P2-201ENST00000521066 465 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 AP003327.1-201ENST00000529684 127 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 AC021739.1-201ENST00000559631 174 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 MTND6P33-201ENST00000571794 183 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 AC068205.3-201ENST00000636385 468 ntBASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.25□□□□□ -1.73
CUEDC1Q9NWM3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 RNA5SP307-201ENST00000362863 116 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 SNORA14A-201ENST00000364773 135 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 RNU6-622P-201ENST00000384272 103 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 RNU6-905P-201ENST00000384434 107 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 MIRLET7F2-201ENST00000385277 83 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 MIR767-201ENST00000390228 109 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 RNA5SP171-201ENST00000391071 115 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 RNA5SP354-201ENST00000391247 136 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 AL365496.1-201ENST00000426885 215 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 HMGN2P10-201ENST00000448085 265 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 AC108022.1-201ENST00000493466 478 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 SNORA31.9-201ENST00000516429 84 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 AL160236.1-201ENST00000556317 195 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 AC027176.1-201ENST00000560204 514 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 MIR3923-201ENST00000579521 83 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 ARF4P1-201ENST00000605447 541 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 AL591034.3-201ENST00000605511 685 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 AC025754.2-201ENST00000606491 432 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 MIR7154-201ENST00000620673 73 ntBASIC4.24□□□□□ -1.73
CUEDC1Q9NWM3 AP001486.2-201ENST00000561652 5113 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 MIR331-201ENST00000362302 94 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 SNORD114-19-201ENST00000363072 75 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 SNORD18B-201ENST00000365659 72 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 RNU6-106P-201ENST00000384405 107 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 RNU6-383P-201ENST00000410864 94 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 RNU2-55P-201ENST00000411146 174 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 CYCSP49-201ENST00000420810 319 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 SNRPGP8-201ENST00000454064 226 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 RN7SL810P-201ENST00000493031 276 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 RN7SKP19-201ENST00000516016 252 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 AC069240.1-201ENST00000548774 375 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 AC131055.1-201ENST00000584626 316 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 AC006130.2-201ENST00000586202 326 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 AC024220.1-201ENST00000603675 484 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 AC114781.5-201ENST00000615297 108 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 MIR6075-201ENST00000620782 95 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 U6.115-201ENST00000636045 103 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 SNORD98-201ENST00000636377 67 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 AC004944.1-201ENST00000517807 3059 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 AC002543.1-201ENST00000299783 1954 ntBASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CUEDC1Q9NWM3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms