Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC005014.2-201ENST00000607795 599 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 MIR6852-201ENST00000621699 66 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 MIR6132-201ENST00000622083 109 ntBASIC2.26□□□□□ -2.05
SIX2Q9NPC8 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
SIX2Q9NPC8 AP000560.1-201ENST00000624150 1937 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SIX2Q9NPC8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SIX2Q9NPC8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.25□□□□□ -2.05
SIX2Q9NPC8 MIR369-201ENST00000362155 70 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 RNU6-529P-201ENST00000363383 104 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 Y_RNA.138-201ENST00000363462 102 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 SNORA68.1-201ENST00000364537 132 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 RNU6-1286P-201ENST00000383871 107 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 MIR559-201ENST00000385188 96 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 RNU6-1328P-201ENST00000410938 106 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 MTCO2P12-201ENST00000427426 682 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 AC078809.1-201ENST00000427601 140 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 RPL23AP50-201ENST00000434149 455 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 AC244670.1-201ENST00000436879 112 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 AL513124.1-201ENST00000450410 614 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 MIR2053-201ENST00000459295 91 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.25□□□□□ -2.05
SIX2Q9NPC8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.25□□□□□ -2.05
SIX2Q9NPC8 AC016632.1-201ENST00000503994 196 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 RNU6-120P-201ENST00000516077 103 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.25□□□□□ -2.05
SIX2Q9NPC8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.25□□□□□ -2.05
SIX2Q9NPC8 MIR4765-201ENST00000585007 77 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 FO624990.1-201ENST00000636373 85 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 MTND5P30-201ENST00000452896 1731 ntBASIC2.25□□□□□ -2.05
SIX2Q9NPC8 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AC092268.1-201ENST00000342691 405 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 RNU6-1115P-201ENST00000362490 106 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 RNU6-212P-201ENST00000362642 104 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 RNU6-595P-201ENST00000363944 107 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 Y_RNA.197-201ENST00000364004 102 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 U3.13-201ENST00000364804 214 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 Y_RNA.395-201ENST00000383945 109 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 RNU6-968P-201ENST00000384076 107 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 Y_RNA.504-201ENST00000384481 104 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 MIR186-201ENST00000384988 86 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SIX2Q9NPC8 SNORA26.3-201ENST00000391119 136 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AC097463.2-201ENST00000421074 142 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AIMP1P2-201ENST00000425294 312 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AL353997.1-201ENST00000432936 108 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.24□□□□□ -2.05
SIX2Q9NPC8 RPL23AP58-201ENST00000440453 469 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AC104564.1-201ENST00000493028 407 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 RPL22P13-201ENST00000493291 347 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AC022493.2-201ENST00000506122 481 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 SNORA25.11-201ENST00000515935 105 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 RNA5SP112-201ENST00000515937 99 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 RNU6-470P-201ENST00000515954 104 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AC115990.1-201ENST00000526957 301 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AP000889.1-201ENST00000530968 660 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 MRPS36P4-201ENST00000534436 298 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AC016256.1-201ENST00000547971 354 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.24□□□□□ -2.05
SIX2Q9NPC8 MIR5571-201ENST00000577998 113 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AC073410.2-201ENST00000603240 332 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 IGHVIII-44-202ENST00000636235 289 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AL450472.1-202ENST00000637286 180 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 MIR7515-201ENST00000637837 67 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 Z75746.1-201ENST00000440243 2080 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 AC233981.2-201ENST00000611524 1614 ntBASIC2.24□□□□□ -2.05
SIX2Q9NPC8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SIX2Q9NPC8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SIX2Q9NPC8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SIX2Q9NPC8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SIX2Q9NPC8 RNY1P16-201ENST00000363063 111 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 RNU6-142P-201ENST00000384019 107 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 RNU1-57P-201ENST00000384491 166 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 RNU6-1011P-201ENST00000384668 107 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 MIR1302-11-201ENST00000408051 138 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 MIR1302-9-201ENST00000408365 138 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 MIR1302-10-201ENST00000408734 138 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 AL358453.1-201ENST00000422522 250 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 MICF-203ENST00000432679 129 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 GPM6BP3-201ENST00000442797 145 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 AC025033.1-201ENST00000463883 194 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 RPL30P1-201ENST00000488676 339 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 RPL17P19-201ENST00000489069 552 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 AIG1P1-201ENST00000503376 148 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 IGKV3-31-201ENST00000523109 329 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.23□□□□□ -2.05
SIX2Q9NPC8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.23□□□□□ -2.05
SIX2Q9NPC8 AC007375.1-201ENST00000554513 578 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.23□□□□□ -2.05
SIX2Q9NPC8 MIR5701-3-201ENST00000578890 82 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 MIR5701-1-201ENST00000585138 82 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.23□□□□□ -2.05
SIX2Q9NPC8 MIR1302-2-201ENST00000607096 138 ntBASIC2.23□□□□□ -2.05
SIX2Q9NPC8 MIR5701-2-201ENST00000615634 82 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms