Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.46□□□□□ -2.02
PCDH9Q9HC56 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.45□□□□□ -2.02
PCDH9Q9HC56 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.45□□□□□ -2.02
PCDH9Q9HC56 ZNF299P-201ENST00000406845 1804 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PCDH9Q9HC56 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.40-201ENST00000362645 93 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.132-201ENST00000363421 102 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.197-201ENST00000364004 102 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 SNORD114-30-201ENST00000364448 72 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 SNORA68.1-201ENST00000364537 132 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 RNU6-99P-201ENST00000364721 107 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 RNU6-142P-201ENST00000384019 107 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 RNU6-1083P-201ENST00000384022 107 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.445-201ENST00000384168 102 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 RNU6-474P-201ENST00000384243 107 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 RNU2-23P-201ENST00000410545 195 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.45□□□□□ -2.02
PCDH9Q9HC56 AL590135.1-201ENST00000422215 156 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 AC019205.3-201ENST00000424573 156 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.45□□□□□ -2.02
PCDH9Q9HC56 AC016700.2-201ENST00000446011 156 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 AC073901.1-201ENST00000462471 408 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 RPL22P13-201ENST00000493291 347 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 AC015911.1-201ENST00000495111 156 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 AC016632.1-201ENST00000503994 196 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 AC021146.2-201ENST00000504736 556 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 HMGB3P3-201ENST00000510526 400 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.45□□□□□ -2.02
PCDH9Q9HC56 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 RNU6-699P-201ENST00000517081 110 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 MIR5696-201ENST00000578474 85 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 AC073410.2-201ENST00000603240 332 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 AL353621.2-201ENST00000605340 133 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 MIR6852-201ENST00000621699 66 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 MTND5P30-201ENST00000452896 1731 ntBASIC2.45□□□□□ -2.02
PCDH9Q9HC56 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.45□□□□□ -2.02
PCDH9Q9HC56 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PCDH9Q9HC56 Z82209.1-201ENST00000422141 2135 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 RNU6-1010P-201ENST00000362757 107 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 SNORD42.2-201ENST00000365570 69 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 MIR186-201ENST00000384988 86 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 RNU6-1328P-201ENST00000410938 106 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 AC009963.1-201ENST00000417265 157 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 EIF1AXP1-201ENST00000419267 435 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.44□□□□□ -2.02
PCDH9Q9HC56 RPL23AP95-201ENST00000426806 265 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 AC005534.2-201ENST00000431047 433 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.44□□□□□ -2.02
PCDH9Q9HC56 Z82188.1-201ENST00000436709 154 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.44□□□□□ -2.02
PCDH9Q9HC56 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.44□□□□□ -2.02
PCDH9Q9HC56 AL513124.1-201ENST00000450410 614 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 RNU7-26P-201ENST00000458980 63 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 RPL30P1-201ENST00000488676 339 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 RPL17P19-201ENST00000489069 552 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.44□□□□□ -2.02
PCDH9Q9HC56 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.44□□□□□ -2.02
PCDH9Q9HC56 SNORA31.16-201ENST00000516773 139 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 CYP2C61P-201ENST00000604072 290 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 AL356157.2-201ENST00000605122 111 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 SNORA43.4-201ENST00000629559 138 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 AC243829.7-201ENST00000633081 225 ntBASIC2.44□□□□□ -2.02
PCDH9Q9HC56 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
PCDH9Q9HC56 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PCDH9Q9HC56 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.31-201ENST00000362574 102 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 RNU6-1285P-201ENST00000363480 105 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 RNU6-595P-201ENST00000363944 107 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.216-201ENST00000364205 93 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 RNU6-1286P-201ENST00000383871 107 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 SNORA29-201ENST00000384183 140 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 Y_RNA.463-201ENST00000384271 102 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 RNU1-57P-201ENST00000384491 166 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 MIR559-201ENST00000385188 96 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 MIR1302-11-201ENST00000408051 138 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 MIR1302-9-201ENST00000408365 138 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 MIR1302-10-201ENST00000408734 138 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 RNA5SP494-201ENST00000410653 129 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDH9Q9HC56 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDH9Q9HC56 AC092423.1-201ENST00000430165 186 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 AL513328.1-201ENST00000446460 224 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.43□□□□□ -2.02
PCDH9Q9HC56 AC140059.1-201ENST00000489238 361 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 AC105758.1-201ENST00000506038 399 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.43□□□□□ -2.02
PCDH9Q9HC56 RNU5F-2P-201ENST00000516066 82 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 AC109329.2-201ENST00000519658 482 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 AC079598.5-201ENST00000547460 117 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 MIR3199-1-201ENST00000582434 88 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.43□□□□□ -2.02
PCDH9Q9HC56 7SK.7-201ENST00000603504 247 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 AC103810.6-201ENST00000606708 136 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 MIR1302-2-201ENST00000607096 138 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 MIR1244-1-201ENST00000612829 85 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 CTSLP2-204ENST00000629029 392 ntBASIC2.43□□□□□ -2.02
PCDH9Q9HC56 MIR1244-3-201ENST00000635744 85 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms