Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 EEF1A1P40-201ENST00000412883 573 ntBASIC0.81□□□□□ -2.28
UPF3BQ9BZI7 COX6CP10-201ENST00000416832 224 ntBASIC0.81□□□□□ -2.28
UPF3BQ9BZI7 MTND5P15-201ENST00000434246 349 ntBASIC0.81□□□□□ -2.28
UPF3BQ9BZI7 AC007547.1-201ENST00000462177 490 ntBASIC0.81□□□□□ -2.28
UPF3BQ9BZI7 MTCO3P28-201ENST00000513351 515 ntBASIC0.81□□□□□ -2.28
UPF3BQ9BZI7 RNU6-123P-201ENST00000516163 102 ntBASIC0.81□□□□□ -2.28
UPF3BQ9BZI7 AC087883.1-201ENST00000551882 391 ntBASIC0.81□□□□□ -2.28
UPF3BQ9BZI7 Z69720.2-201ENST00000624755 279 ntBASIC0.81□□□□□ -2.28
UPF3BQ9BZI7 MTND4P14-201ENST00000435799 1354 ntBASIC0.81□□□□□ -2.28
UPF3BQ9BZI7 SNORD56.2-201ENST00000363242 71 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 RNU4-92P-201ENST00000363783 136 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 MIR1197-201ENST00000408818 88 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 RNA5SP193-201ENST00000410353 107 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 GTF2IP13-201ENST00000438487 386 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 MTND3P1-201ENST00000441336 220 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 HAR1A.1-201ENST00000459583 118 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 SCARNA16.2-201ENST00000516520 172 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 AC022616.6-201ENST00000520479 119 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 AP002453.2-201ENST00000533503 320 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 MIR3923-201ENST00000579521 83 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 HMGN1P30-201ENST00000589286 268 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 BNIP3P16-201ENST00000589779 534 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 AC097478.2-201ENST00000610572 514 ntBASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.8□□□□□ -2.28
UPF3BQ9BZI7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 U3.9-201ENST00000363823 204 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 SNORA72.2-201ENST00000365028 127 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 SNORD12-201ENST00000391002 90 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 SNORD115.1-201ENST00000391109 76 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 SNORA26.3-201ENST00000391119 136 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 RNU6-607P-201ENST00000411283 108 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 RNU6-387P-201ENST00000411331 105 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 PIGFP2-201ENST00000421400 651 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 AC244670.1-201ENST00000436879 112 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 AC243964.1-201ENST00000441814 261 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 HSPE1P13-201ENST00000451143 297 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 RPS26P45-201ENST00000471748 340 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 MTND2P31-201ENST00000512602 616 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 RNU6-856P-201ENST00000516959 98 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 AC105185.1-201ENST00000518705 535 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 AL442163.3-201ENST00000554110 156 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 AC109446.1-201ENST00000566172 220 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 AC080013.3-201ENST00000606839 578 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 AC006927.4-201ENST00000639187 543 ntBASIC0.79□□□□□ -2.28
UPF3BQ9BZI7 AC008163.1-202ENST00000636004 2889 ntBASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 RNU6-534P-201ENST00000364877 106 ntBASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 HIGD1AP15-201ENST00000416198 280 ntBASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 AC010531.2-201ENST00000465012 153 ntBASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 RPL39P38-201ENST00000467018 153 ntBASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 RNU6-496P-201ENST00000516145 99 ntBASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 SNORA70.22-201ENST00000517160 124 ntBASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 MIR4709-201ENST00000577272 72 ntBASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 AC012507.3-201ENST00000603556 477 ntBASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 AC106858.1-201ENST00000637497 429 ntBASIC0.78□□□□□ -2.28
UPF3BQ9BZI7 RNU1-76P-201ENST00000362903 159 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 U3.4-201ENST00000363352 213 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 RNU6-35P-201ENST00000384530 107 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AL356776.1-201ENST00000406574 447 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 RNU2-3P-201ENST00000410144 191 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AK3P2-201ENST00000507976 429 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 RNU2-34P-201ENST00000516534 121 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 RNU11-2P-201ENST00000516898 142 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AC109479.2-201ENST00000517842 174 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AC008088.1-201ENST00000580993 280 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 MTCO2P2-201ENST00000591258 225 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AC110760.3-201ENST00000598794 467 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 MTND3P19-201ENST00000603825 345 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 PCGEM1.1-201ENST00000613431 131 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AC243829.3-201ENST00000622177 108 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AC097372.5-201ENST00000623665 376 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AC068647.2-201ENST00000637380 353 ntBASIC0.77□□□□□ -2.29
UPF3BQ9BZI7 AC092268.1-201ENST00000342691 405 ntBASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 SNORD114-24-201ENST00000365029 72 ntBASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 RNU6-43P-201ENST00000384302 107 ntBASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 MED13P1-201ENST00000428342 171 ntBASIC0.76□□□□□ -2.29
UPF3BQ9BZI7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms