Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL590705.4-201ENST00000532209 134 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 MIR4524B-201ENST00000581569 115 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 MIR4769-201ENST00000584126 77 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 AL138963.2-201ENST00000605137 226 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 RPL23AP88-201ENST00000605759 454 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 AC069234.5-201ENST00000611056 416 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 AC005520.5-201ENST00000613926 164 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTFDC1Q9BY42 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 RNU5B-2P-201ENST00000363036 113 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 Y_RNA.509-201ENST00000384506 99 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 RNU6-700P-201ENST00000391043 107 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 RNA5SP425-201ENST00000410336 112 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 AL161788.1-201ENST00000441805 169 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 RNU7-152P-201ENST00000458982 64 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 SNORA31.16-201ENST00000516773 139 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 IGKV3-31-201ENST00000523109 329 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 AL158827.2-201ENST00000602494 330 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 AL713866.2-201ENST00000603579 219 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 RMST_6.1-201ENST00000611980 203 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 AC084781.2-201ENST00000615568 161 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 AC090574.1-201ENST00000623186 233 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 AL691447.3-201ENST00000635020 330 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 MTND4LP32-201ENST00000636111 270 ntBASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RTFDC1Q9BY42 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 Y_RNA.146-201ENST00000363549 102 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 Y_RNA.187-201ENST00000363918 113 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 Y_RNA.533-201ENST00000384596 114 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 MIR181B1-201ENST00000385240 110 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 RN7SKP223-201ENST00000410582 62 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 Y_RNA.646-201ENST00000410980 101 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 HMGB3P2-201ENST00000411913 584 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 AL358453.1-201ENST00000422522 250 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 AC003685.2-201ENST00000422795 395 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 AC087477.1-201ENST00000465747 340 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 SRIP1-201ENST00000489235 288 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 AC021146.2-201ENST00000504736 556 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 RNU6-1170P-201ENST00000515974 106 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 SCARNA16.2-201ENST00000516520 172 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 MIR4648-201ENST00000580107 72 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 RPL17P51-201ENST00000605218 238 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 AL450472.1-202ENST00000637286 180 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 AC073544.1-201ENST00000600110 1595 ntBASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTFDC1Q9BY42 Z82209.1-201ENST00000422141 2135 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 Y_RNA.404-201ENST00000383978 102 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 SNORD116-29-201ENST00000384516 83 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 MIR208B-201ENST00000401172 77 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 MIR320B2-201ENST00000408479 138 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 RNA5SP492-201ENST00000411330 114 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 AL135786.1-201ENST00000415892 214 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 MTCYBP10-201ENST00000424905 650 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 CBX3P6-201ENST00000430257 527 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 AC104389.3-201ENST00000445629 235 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 snoU13.30-201ENST00000458951 104 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 Y_RNA.638-201ENST00000459374 113 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 RPL17P19-201ENST00000489069 552 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 RPL23AP75-201ENST00000491601 451 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 SNORA48.11-201ENST00000517015 89 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 CBX3P8-201ENST00000532412 525 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 MRPS36P4-201ENST00000534436 298 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 AC104581.2-201ENST00000572227 430 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 AC100812.1-201ENST00000607622 580 ntBASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.11□□□□□ -1.91
RTFDC1Q9BY42 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 snoU2_19.1-201ENST00000362361 80 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 Y_RNA.58-201ENST00000362807 102 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 RNU1-72P-201ENST00000362976 153 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 RNY1P16-201ENST00000363063 111 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 Y_RNA.154-201ENST00000363624 102 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 RNU6-137P-201ENST00000363680 108 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 RNU5F-3P-201ENST00000363767 117 ntBASIC3.1□□□□□ -1.91
RTFDC1Q9BY42 U3.9-201ENST00000363823 204 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms