Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 RNU6-430P-201ENST00000517078 107 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 AC103996.1-201ENST00000555468 102 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 AL356157.2-201ENST00000605122 111 ntBASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
RPAP1Q9BWH6 Y_RNA.159-201ENST00000363674 87 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 RNA5SP493-201ENST00000364115 91 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 RNU6-266P-201ENST00000364225 107 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 SNORD114-6-201ENST00000364393 72 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 RNU6-827P-201ENST00000365553 106 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 RNU6-26P-201ENST00000383985 107 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 RNU6-203P-201ENST00000384038 104 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 RNU6-348P-201ENST00000384386 107 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 RNU6-160P-201ENST00000384591 107 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 MIR758-201ENST00000390227 88 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 SNORA40.6-201ENST00000391153 128 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 AL033519.2-201ENST00000403958 392 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 AL357139.1-201ENST00000407792 426 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 SNORA31.16-201ENST00000516773 139 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 AL137161.1-201ENST00000532231 390 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 HSPE1P4-201ENST00000550617 308 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 AL160236.1-201ENST00000556317 195 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 MIR3941-201ENST00000582572 103 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 AC110760.3-201ENST00000598794 467 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 AC121247.2-201ENST00000604776 136 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 AC087752.4-201ENST00000605911 462 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 MIR6734-201ENST00000621166 68 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 AC130454.1-201ENST00000622948 401 ntBASIC1.59□□□□□ -2.15
RPAP1Q9BWH6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 MIR96-201ENST00000362288 78 ntBASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 AC009310.1-201ENST00000414414 451 ntBASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 SNAP23P1-201ENST00000433229 246 ntBASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 AL035666.1-201ENST00000446195 348 ntBASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 ARL2BPP4-201ENST00000506854 471 ntBASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 AK3P2-201ENST00000507976 429 ntBASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 AP005597.4-201ENST00000526762 229 ntBASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 AC109446.1-201ENST00000566172 220 ntBASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 MTATP6P3-201ENST00000581686 676 ntBASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 AC103810.8-201ENST00000607347 118 ntBASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.59□□□□□ -2.16
RPAP1Q9BWH6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 RNU6-552P-201ENST00000362869 119 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 RNU6-23P-201ENST00000363283 107 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 RNU1-22P-201ENST00000363334 158 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 RNY1-201ENST00000364228 113 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 RNU4-56P-201ENST00000364700 142 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 RNU1-93P-201ENST00000364704 169 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 RNU6-517P-201ENST00000384362 110 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 MTCYBP2-201ENST00000407745 171 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 RN7SKP61-201ENST00000410642 295 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 HSPE1P21-201ENST00000438283 308 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 HSPE1P24-201ENST00000450782 238 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 RNU7-167P-201ENST00000459160 62 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 AC087884.1-201ENST00000469738 328 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 RNVU1-2-201ENST00000516326 135 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 AC069113.1-201ENST00000517763 267 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 AC011604.1-201ENST00000545978 196 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 MIR3169-201ENST00000578032 83 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 MIR3923-201ENST00000579521 83 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 AC022709.1-201ENST00000615967 87 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.58□□□□□ -2.16
RPAP1Q9BWH6 RNU1-62P-201ENST00000362599 164 ntBASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 Y_RNA.332-201ENST00000365271 113 ntBASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 SNORA48.1-201ENST00000390879 135 ntBASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 AL133396.1-201ENST00000432048 687 ntBASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 Y_RNA.695-201ENST00000516715 107 ntBASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 HIF1AP1-201ENST00000553642 175 ntBASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 AC010900.2-201ENST00000604508 210 ntBASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 AP001596.2-201ENST00000608410 312 ntBASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 AL158063.1-201ENST00000615349 536 ntBASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 AL590240.4-201ENST00000616908 390 ntBASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 AC005609.4-201ENST00000625071 447 ntBASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
RPAP1Q9BWH6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 CBX3P1-201ENST00000325243 554 ntBASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 RNA5SP201-201ENST00000410316 124 ntBASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms