Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 FABP5P4-201ENST00000437203 171 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC073614.1-201ENST00000438690 650 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC016700.2-201ENST00000446011 156 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU7-34P-201ENST00000459394 64 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU7-21P-201ENST00000459430 62 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 SRRM1P2-201ENST00000464531 1192 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC092991.1-201ENST00000477176 376 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC002350.1-201ENST00000490759 375 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC015911.1-201ENST00000495111 156 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU5F-4P-201ENST00000516581 114 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 DEFB108E-201ENST00000524692 240 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC011604.1-201ENST00000545978 196 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC021231.3-201ENST00000558497 370 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 SNORA59B-202ENST00000578183 701 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.23□□□□□ -2.37
LIMD2Q9BT23 DEFB131E-202ENST00000602581 683 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 PRELID3BP2-201ENST00000605362 201 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC012557.2-201ENST00000605919 418 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 RNU6-6P-201ENST00000606623 107 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC108747.1-201ENST00000609508 535 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AC012409.4-201ENST00000612923 249 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 AL512427.1-201ENST00000618593 349 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 Z69720.2-201ENST00000624755 279 ntBASIC0.23□□□□□ -2.37
LIMD2Q9BT23 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
LIMD2Q9BT23 MTND4P5-201ENST00000435821 1374 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AL445523.1-201ENST00000451184 1362 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 U3.4-201ENST00000363352 213 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 Y_RNA.132-201ENST00000363421 102 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 RNU6-945P-201ENST00000383947 107 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AL353777.1-201ENST00000425552 326 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AC010975.2-201ENST00000427781 588 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AL133396.1-201ENST00000432048 687 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 RPS23P5-201ENST00000495419 428 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AC112206.4-201ENST00000515142 405 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 RN7SKP12-201ENST00000516275 143 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AP002453.2-201ENST00000533503 320 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AL390123.1-201ENST00000603216 237 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AL031281.1-201ENST00000604049 488 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AL139286.2-201ENST00000606838 396 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AL139022.2-201ENST00000606934 443 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AC243829.6-201ENST00000612652 106 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AC136475.10-201ENST00000620253 385 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AP002782.1-201ENST00000623107 614 ntBASIC0.22□□□□□ -2.37
LIMD2Q9BT23 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.22□□□□□ -2.37
LIMD2Q9BT23 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.21□□□□□ -2.38
LIMD2Q9BT23 RNU6-877P-201ENST00000383868 107 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 MIR300-201ENST00000401138 83 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 ERHP2-201ENST00000402323 299 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 RNU2-3P-201ENST00000410144 191 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 RNA5SP247-201ENST00000411181 105 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 RNU6-607P-201ENST00000411283 108 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.21□□□□□ -2.38
LIMD2Q9BT23 EEF1A1P40-201ENST00000412883 573 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 C1DP2-201ENST00000418167 426 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 BTBD7P2-201ENST00000441962 620 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 AL606662.1-201ENST00000445763 553 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 MTND1P12-201ENST00000455231 147 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 C1DP4-201ENST00000455429 424 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.21□□□□□ -2.38
LIMD2Q9BT23 AC107934.1-201ENST00000522215 217 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 AL929325.1-201ENST00000603096 117 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 AL512506.1-201ENST00000613918 449 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 AC116165.2-201ENST00000616705 206 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 AL121895.2-201ENST00000619558 447 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 MIR6513-201ENST00000621188 64 ntBASIC0.21□□□□□ -2.38
LIMD2Q9BT23 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.21□□□□□ -2.38
LIMD2Q9BT23 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
LIMD2Q9BT23 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
LIMD2Q9BT23 RNU6-433P-201ENST00000363216 104 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 SNORD32A-201ENST00000364805 84 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 VTRNA1-3-201ENST00000365645 89 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 RNU6-505P-201ENST00000384427 107 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 NFU1P2-201ENST00000448700 469 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.2□□□□□ -2.38
LIMD2Q9BT23 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.2□□□□□ -2.38
LIMD2Q9BT23 RNU7-90P-201ENST00000459216 62 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.2□□□□□ -2.38
LIMD2Q9BT23 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.2□□□□□ -2.38
LIMD2Q9BT23 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
LIMD2Q9BT23 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.2□□□□□ -2.38
LIMD2Q9BT23 Y_RNA.676-201ENST00000516393 96 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 RNU7-51P-201ENST00000516560 62 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 AP001893.2-201ENST00000526949 202 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 AC007834.2-201ENST00000536310 343 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 ZNF321P-202ENST00000550843 495 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.2□□□□□ -2.38
LIMD2Q9BT23 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.2□□□□□ -2.38
LIMD2Q9BT23 MIR5692A1-201ENST00000580523 69 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 AC009994.1-201ENST00000606889 253 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 AL513423.1-201ENST00000621695 132 ntBASIC0.2□□□□□ -2.38
LIMD2Q9BT23 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.2□□□□□ -2.38
LIMD2Q9BT23 AC068700.1-201ENST00000565862 3754 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms