Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.38□□□□□ -2.35
LYSMD1Q96S90 AL353765.1-201ENST00000605514 183 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.38□□□□□ -2.35
LYSMD1Q96S90 AC006386.1-201ENST00000619436 415 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 PVT1_3.1-201ENST00000620853 95 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 AC103706.2-201ENST00000638080 240 ntBASIC0.38□□□□□ -2.35
LYSMD1Q96S90 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
LYSMD1Q96S90 RNU6-433P-201ENST00000363216 104 ntBASIC0.37□□□□□ -2.35
LYSMD1Q96S90 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
LYSMD1Q96S90 MIR10B-201ENST00000385011 110 ntBASIC0.37□□□□□ -2.35
LYSMD1Q96S90 AL031779.1-201ENST00000415663 330 ntBASIC0.37□□□□□ -2.35
LYSMD1Q96S90 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.37□□□□□ -2.35
LYSMD1Q96S90 AP000797.1-201ENST00000478870 387 ntBASIC0.37□□□□□ -2.35
LYSMD1Q96S90 SNORA19.3-201ENST00000516165 130 ntBASIC0.37□□□□□ -2.35
LYSMD1Q96S90 AC107934.1-201ENST00000522215 217 ntBASIC0.37□□□□□ -2.35
LYSMD1Q96S90 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.37□□□□□ -2.35
LYSMD1Q96S90 RNU6-1192P-201ENST00000612197 107 ntBASIC0.37□□□□□ -2.35
LYSMD1Q96S90 PART1_2.1-201ENST00000612397 250 ntBASIC0.37□□□□□ -2.35
LYSMD1Q96S90 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
LYSMD1Q96S90 RNU6-489P-201ENST00000618289 107 ntBASIC0.37□□□□□ -2.35
LYSMD1Q96S90 AL121895.2-201ENST00000619558 447 ntBASIC0.37□□□□□ -2.35
LYSMD1Q96S90 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.37□□□□□ -2.35
LYSMD1Q96S90 AC136475.10-201ENST00000620253 385 ntBASIC0.37□□□□□ -2.35
LYSMD1Q96S90 MTND4P14-201ENST00000435799 1354 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 SNORA33-201ENST00000363664 130 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 RNU4-56P-201ENST00000364700 142 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 SNORD116.1-201ENST00000365628 92 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 AC114491.1-201ENST00000416095 246 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 AC011233.1-201ENST00000422812 283 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 AL596276.1-201ENST00000434465 418 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 MTCO3P18-201ENST00000440206 761 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.36□□□□□ -2.35
LYSMD1Q96S90 AL049829.1-201ENST00000465411 156 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 HMGN1P12-201ENST00000499125 195 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 MTCO3P7-201ENST00000510008 774 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 RNU6-922P-201ENST00000516753 99 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 RNU6-856P-201ENST00000516959 98 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 AC011979.2-201ENST00000527568 352 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.36□□□□□ -2.35
LYSMD1Q96S90 AL606834.3-201ENST00000602615 496 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 AC121334.2-201ENST00000605387 271 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 AP000943.4-201ENST00000622912 357 ntBASIC0.36□□□□□ -2.35
LYSMD1Q96S90 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.36□□□□□ -2.35
LYSMD1Q96S90 Y_RNA.132-201ENST00000363421 102 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 RNU6-105P-201ENST00000363909 104 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 VTRNA1-3-201ENST00000365645 89 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 RNU6-418P-201ENST00000384035 107 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 RNU6-43P-201ENST00000384302 107 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 SNORA80D-201ENST00000384488 135 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 RNU6-692P-201ENST00000384496 107 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AF228730.1-201ENST00000397972 663 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 RPS20P2-201ENST00000402520 389 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AC060773.1-201ENST00000421698 310 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 RPL23AP95-201ENST00000426806 265 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 CALM2P2-201ENST00000428512 440 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AC244670.1-201ENST00000436879 112 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AC243964.1-201ENST00000441814 261 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 MTND5P2-201ENST00000442927 1142 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AC011406.1-201ENST00000512440 370 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.35□□□□□ -2.35
LYSMD1Q96S90 MTATP6P15-201ENST00000527233 835 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 APOOP3-201ENST00000536787 586 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AC018659.1-201ENST00000551083 169 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.35□□□□□ -2.35
LYSMD1Q96S90 MIR4742-201ENST00000581069 85 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AL929325.1-201ENST00000603096 117 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 MTND3P19-201ENST00000603825 345 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AL513534.2-201ENST00000603836 250 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AP002360.4-201ENST00000606980 481 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AP001596.2-201ENST00000608410 312 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
LYSMD1Q96S90 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
LYSMD1Q96S90 U3.9-201ENST00000363823 204 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 Y_RNA.363-201ENST00000365529 113 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 RNU6-969P-201ENST00000383900 105 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 RNU6-1105P-201ENST00000384774 107 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 ERHP2-201ENST00000402323 299 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 RNA5SP201-201ENST00000410316 124 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 RNU6-293P-201ENST00000411259 106 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.34□□□□□ -2.36
LYSMD1Q96S90 EEF1A1P40-201ENST00000412883 573 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 HIGD1AP15-201ENST00000416198 280 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AC010975.2-201ENST00000427781 588 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 C1DP4-201ENST00000455429 424 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AC098869.1-201ENST00000481627 292 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 RBBP4P6-201ENST00000508098 202 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.34□□□□□ -2.36
LYSMD1Q96S90 MTND3P25-201ENST00000509243 135 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.34□□□□□ -2.36
LYSMD1Q96S90 RNU6-276P-201ENST00000516114 96 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 RNU6-947P-201ENST00000516264 106 ntBASIC0.34□□□□□ -2.36
LYSMD1Q96S90 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.34□□□□□ -2.36
LYSMD1Q96S90 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms