Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MICF-203ENST00000432679 129 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 GSTA11P-201ENST00000452866 669 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 TOMM22P6-201ENST00000465035 409 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 AL121594.1-201ENST00000475906 575 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 RNA5SP367-201ENST00000516557 118 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 Y_RNA.706-201ENST00000516933 99 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 AC104581.2-201ENST00000572227 430 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 AC092447.9-201ENST00000603395 144 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 Z98751.3-201ENST00000604447 521 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 AL034555.1-201ENST00000604816 211 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 AC100812.1-201ENST00000607622 580 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 AC040896.1-201ENST00000613819 479 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 AC083806.3-201ENST00000614016 455 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 AC091925.1-201ENST00000623204 462 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 AC135776.4-201ENST00000624300 1904 ntBASIC3.07□□□□□ -1.92
CDK5RAP3Q96JB5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 RNY3P11-201ENST00000364153 102 ntBASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 RNU6-220P-201ENST00000390919 107 ntBASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 MTND4P19-201ENST00000446659 478 ntBASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 AC073901.1-201ENST00000462471 408 ntBASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 AC140059.1-201ENST00000489238 361 ntBASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 RNU6-567P-201ENST00000516746 107 ntBASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 RNU7-4P-201ENST00000516961 62 ntBASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 AL355596.1-201ENST00000565399 3996 ntBASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 MIR5194-201ENST00000582634 120 ntBASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 AC016925.2-201ENST00000605108 242 ntBASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 AL355802.3-201ENST00000607571 545 ntBASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CDK5RAP3Q96JB5 Y_RNA.148-201ENST00000363557 117 ntBASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 MIR190B-201ENST00000401119 79 ntBASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 AL139095.1-201ENST00000404326 391 ntBASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 Y_RNA.605-201ENST00000410577 105 ntBASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 RPL30P4-201ENST00000429309 333 ntBASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 AL160004.2-201ENST00000432935 350 ntBASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 RNU7-87P-201ENST00000459343 62 ntBASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.05□□□□□ -1.92
CDK5RAP3Q96JB5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 snoU2_19.1-201ENST00000362361 80 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 RNU6-874P-201ENST00000362390 105 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 SNORD115-32-201ENST00000364079 82 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 RNU1-115P-201ENST00000365329 160 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 Y_RNA.364-201ENST00000365532 101 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 CBX3P9-201ENST00000402326 552 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 RNA5SP21-201ENST00000410917 96 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 COTL1P1-201ENST00000422309 375 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 AC096644.2-201ENST00000429278 159 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 AC105272.1-201ENST00000438604 198 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 AP000705.1-201ENST00000454567 350 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 RNU7-26P-201ENST00000458980 63 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 RNU7-169P-201ENST00000459456 61 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 SCARNA15.1-201ENST00000516384 125 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 AC023442.1-201ENST00000531247 422 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 MIR3923-201ENST00000579521 83 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 AC022432.1-201ENST00000595739 310 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 RPL30P11-203ENST00000598995 310 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 RMST_6.1-201ENST00000611980 203 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 AC137590.2-201ENST00000619709 240 ntBASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CDK5RAP3Q96JB5 Y_RNA.39-201ENST00000362620 98 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 RNU6-1159P-201ENST00000362933 107 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 RNA5SP393-201ENST00000363423 117 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 RNU1-112P-201ENST00000364401 164 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 SNORA33.2-201ENST00000365413 134 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 MIR153-2-201ENST00000385225 87 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AL590004.2-201ENST00000404787 371 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 Z92545.1-201ENST00000411782 234 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AC107083.1-201ENST00000439643 279 ntBASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.03□□□□□ -1.92
CDK5RAP3Q96JB5 AL353752.1-201ENST00000454946 260 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms