Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AF186996.7-201ENST00000492781 209 ntBASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 RNU6-470P-201ENST00000515954 104 ntBASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 AL713866.2-201ENST00000603579 219 ntBASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 AC008121.3-201ENST00000618726 433 ntBASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 AC069528.2-201ENST00000624849 1991 ntBASIC3.18□□□□□ -1.9
CHMP4CQ96CF2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 RNU1-72P-201ENST00000362976 153 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 MIR208B-201ENST00000401172 77 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 RNU2-63P-201ENST00000410792 194 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 RNA5SP184-201ENST00000411071 108 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 HMGB3P2-201ENST00000411913 584 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 EEF1B2P7-201ENST00000451177 676 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 snoU13.30-201ENST00000458951 104 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 MIR2053-201ENST00000459295 91 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 AC090515.1-201ENST00000465295 476 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 AC027575.1-201ENST00000481064 460 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 RPL30P10-201ENST00000488148 337 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 RNU6-826P-201ENST00000516827 104 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 RNU6-586P-201ENST00000517265 104 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 AL449363.1-201ENST00000617815 186 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 AC090971.5-201ENST00000621102 293 ntBASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHMP4CQ96CF2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 RNU6-1032P-201ENST00000384100 107 ntBASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 MTCYBP2-201ENST00000407745 171 ntBASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 RNU2-25P-201ENST00000411041 191 ntBASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 MTCYBP10-201ENST00000424905 650 ntBASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 AC145146.1-201ENST00000496370 254 ntBASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 RN7SKP40-201ENST00000517211 242 ntBASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 MIR5092-201ENST00000583139 88 ntBASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CHMP4CQ96CF2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 RNU4-15P-201ENST00000362613 141 ntBASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 RNA5SP240-201ENST00000365355 128 ntBASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 MIR32-201ENST00000384965 70 ntBASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 AC007098.1-201ENST00000420122 367 ntBASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 Z82188.1-201ENST00000436709 154 ntBASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 Y_RNA.706-201ENST00000516933 99 ntBASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 AC100812.1-201ENST00000607622 580 ntBASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 RMST_6.1-201ENST00000611980 203 ntBASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 IGHVIII-44-202ENST00000636235 289 ntBASIC3.15□□□□□ -1.91
CHMP4CQ96CF2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 RNU6-490P-201ENST00000362985 107 ntBASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 VTRNA1-1-201ENST00000363120 99 ntBASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 SNORD115-32-201ENST00000364079 82 ntBASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 SNORD114-30-201ENST00000364448 72 ntBASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 MIR153-2-201ENST00000385225 87 ntBASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 AC063976.3-201ENST00000426849 329 ntBASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 MTCO3P29-201ENST00000432119 779 ntBASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 OR2AQ1P-201ENST00000451972 200 ntBASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 RNU6-120P-201ENST00000516077 103 ntBASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 AC004584.2-201ENST00000570407 410 ntBASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 AC104581.2-201ENST00000572227 430 ntBASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 AL138963.2-201ENST00000605137 226 ntBASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CHMP4CQ96CF2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CHMP4CQ96CF2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.13□□□□□ -1.91
CHMP4CQ96CF2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.13□□□□□ -1.91
CHMP4CQ96CF2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.13□□□□□ -1.91
CHMP4CQ96CF2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.13□□□□□ -1.91
CHMP4CQ96CF2 RNU6-99P-201ENST00000364721 107 ntBASIC3.13□□□□□ -1.91
CHMP4CQ96CF2 Y_RNA.405-201ENST00000383979 100 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms