Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNU6-91P-201ENST00000607774 107 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.42□□□□□ -1.86
ERCC4Q92889 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 AC137590.2-201ENST00000619709 240 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 AC018692.3-201ENST00000623929 123 ntBASIC3.42□□□□□ -1.86
ERCC4Q92889 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ERCC4Q92889 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
ERCC4Q92889 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.41□□□□□ -1.86
ERCC4Q92889 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ERCC4Q92889 AC010615.1-201ENST00000594254 1764 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 AC091564.4-201ENST00000533934 2194 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 CD24P4-201ENST00000382840 243 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 MIR181B1-201ENST00000385240 110 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 SNORD115-46-201ENST00000390982 71 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 RPS26P42-201ENST00000413485 326 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.41□□□□□ -1.86
ERCC4Q92889 RPL21P38-201ENST00000418090 167 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 PTGES3P4-201ENST00000426243 356 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 RPL23AP83-201ENST00000434984 473 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 AC244670.1-201ENST00000436879 112 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 GPM6BP3-201ENST00000442797 145 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 AC096638.1-201ENST00000444678 216 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 RPL39P29-201ENST00000447779 157 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.41□□□□□ -1.86
ERCC4Q92889 Y_RNA.713-201ENST00000517013 96 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.41□□□□□ -1.86
ERCC4Q92889 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.41□□□□□ -1.86
ERCC4Q92889 AC021231.3-201ENST00000558497 370 ntBASIC3.41□□□□□ -1.86
ERCC4Q92889 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ERCC4Q92889 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ERCC4Q92889 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.41□□□□□ -1.86
ERCC4Q92889 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ERCC4Q92889 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.41□□□□□ -1.86
ERCC4Q92889 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.4□□□□□ -1.86
ERCC4Q92889 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
ERCC4Q92889 RNA5SP139-201ENST00000364340 117 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 RNU6-1027P-201ENST00000383998 107 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 SNORA36A-201ENST00000384221 132 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
ERCC4Q92889 RNU6-750P-201ENST00000390946 107 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 AC096649.2-201ENST00000416186 393 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 AC016700.2-201ENST00000446011 156 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 AP000705.1-201ENST00000454567 350 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 RN7SL633P-201ENST00000488974 297 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 MTND1P19-201ENST00000511780 315 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 Y_RNA.680-201ENST00000516441 93 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 SNORA70.24-201ENST00000517233 118 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.4□□□□□ -1.87
ERCC4Q92889 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.4□□□□□ -1.87
ERCC4Q92889 AC136932.1-201ENST00000574771 208 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.4□□□□□ -1.87
ERCC4Q92889 AL078605.1-201ENST00000603529 500 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 AL161756.2-201ENST00000604597 246 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.4□□□□□ -1.87
ERCC4Q92889 AC240442.1-201ENST00000616055 283 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 MIR7112-201ENST00000616126 65 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.4□□□□□ -1.87
ERCC4Q92889 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.4□□□□□ -1.87
ERCC4Q92889 AC002543.1-201ENST00000299783 1954 ntBASIC3.4□□□□□ -1.87
ERCC4Q92889 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.39□□□□□ -1.87
ERCC4Q92889 Y_RNA.14-201ENST00000362415 103 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 RNU6-525P-201ENST00000363685 104 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 SNORA38.1-201ENST00000364172 131 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 Y_RNA.350-201ENST00000365409 98 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 Y_RNA.439-201ENST00000384119 94 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 SNORA9-201ENST00000384215 133 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 SNORA7.4-201ENST00000384249 137 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 SNORA54-201ENST00000384281 123 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 RNU6-19P-201ENST00000384718 107 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 MIR10B-201ENST00000385011 110 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 SNORD78.2-201ENST00000391076 69 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 MRPL35P1-201ENST00000404272 572 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 RPL19P1-201ENST00000411635 428 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 ARL5AP4-201ENST00000430731 512 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.39□□□□□ -1.87
ERCC4Q92889 AC004383.1-201ENST00000438135 289 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 BX510359.1-201ENST00000456973 237 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 AC022868.1-201ENST00000517767 391 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 MIR4300-201ENST00000581016 96 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 AL391813.1-201ENST00000603098 260 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.39□□□□□ -1.87
ERCC4Q92889 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.39□□□□□ -1.87
ERCC4Q92889 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.39□□□□□ -1.87
ERCC4Q92889 U6.104-201ENST00000637979 90 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 AC010889.1-201ENST00000566193 2666 ntBASIC3.39□□□□□ -1.87
ERCC4Q92889 snoU2_19.2-201ENST00000363024 80 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 Y_RNA.489-201ENST00000384410 101 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 RNU6-1026P-201ENST00000384465 108 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 SNORD15B-201ENST00000384714 146 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 MIR491-201ENST00000384877 84 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 RNU6-159P-201ENST00000391080 106 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 RNU2-49P-201ENST00000410666 184 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.38□□□□□ -1.87
ERCC4Q92889 AL358075.3-201ENST00000426289 226 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.38□□□□□ -1.87
ERCC4Q92889 RPL30P12-201ENST00000474666 353 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 AC098869.1-201ENST00000481627 292 ntBASIC3.38□□□□□ -1.87
ERCC4Q92889 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 238.2 ms