Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 ZNF299P-201ENST00000406845 1804 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.58-201ENST00000362807 102 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.154-201ENST00000363624 102 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 SNORD114-30-201ENST00000364448 72 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 U3.13-201ENST00000364804 214 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 RNY3P1-201ENST00000365085 102 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 RNY3-201ENST00000365484 102 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.431-201ENST00000384086 102 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.473-201ENST00000384333 102 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.490-201ENST00000384413 102 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.504-201ENST00000384481 104 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 RNU6-310P-201ENST00000384655 107 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 RNU6-443P-201ENST00000384780 107 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 MIR524-201ENST00000385242 87 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 SNORA75.6-201ENST00000391318 127 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.646-201ENST00000410980 101 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 GPM6BP3-201ENST00000442797 145 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 EEF1B2P7-201ENST00000451177 676 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 SNRPGP7-201ENST00000469016 106 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 SNORA25.11-201ENST00000515935 105 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 RNU6-567P-201ENST00000516746 107 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 AC007375.1-201ENST00000554513 578 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 AL158827.2-201ENST00000602494 330 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 AL034555.1-201ENST00000604816 211 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 HMGB1P24-202ENST00000615653 685 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 AC126177.8-201ENST00000618339 1015 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 AL691447.3-201ENST00000635020 330 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 MTND4LP32-201ENST00000636111 270 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 AC005336.3-201ENST00000623833 2679 ntBASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SLC44A1Q8WWI5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.2-201ENST00000362330 96 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 RNU4-82P-201ENST00000362443 140 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 RNU5B-2P-201ENST00000363036 113 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 RNA5SP68-201ENST00000363885 119 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.315-201ENST00000365117 102 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 SNORA29-201ENST00000384183 140 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 RNU6-220P-201ENST00000390919 107 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 AL590135.1-201ENST00000422215 156 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 AC019205.3-201ENST00000424573 156 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 AC016700.2-201ENST00000446011 156 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 RPS3P1-201ENST00000456781 192 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 FO393415.2-201ENST00000480085 343 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 AC015911.1-201ENST00000495111 156 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 AC026436.1-201ENST00000510537 270 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 SNORA31.16-201ENST00000516773 139 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 PRELID2P1-201ENST00000552837 301 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 MIR4658-201ENST00000584344 65 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 RPL30P11-203ENST00000598995 310 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 MIR6817-201ENST00000615588 66 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 SCARNA4-201ENST00000629045 128 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 AC243829.7-201ENST00000633081 225 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 ZNF720P1-201ENST00000562403 1939 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 AC080100.1-201ENST00000624239 5356 ntBASIC2.36□□□□□ -2.03
SLC44A1Q8WWI5 AC233981.2-201ENST00000611524 1614 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.11-201ENST00000362375 109 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 RNU6-595P-201ENST00000363944 107 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 RNU4-56P-201ENST00000364700 142 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 RNA5SP126-201ENST00000365092 109 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.533-201ENST00000384596 114 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 RPS20P15-201ENST00000412792 311 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 RPS26P42-201ENST00000413485 326 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 AL358453.1-201ENST00000422522 250 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 RNA5SP148-201ENST00000516527 94 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 RNA5SP384-201ENST00000516615 116 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 RNU6-1213P-201ENST00000517075 94 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 CBX3P8-201ENST00000532412 525 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 AC023824.2-201ENST00000566185 400 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 AL078605.1-201ENST00000603529 500 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms