Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL645568.3-201ENST00000433683 316 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 AL591212.2-201ENST00000433923 257 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 UBBP3-201ENST00000445497 241 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.52□□□□□ -2.01
SNED1Q8TER0 AC108729.3-201ENST00000513484 108 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 RNU6-307P-201ENST00000516743 106 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 RN7SKP258-201ENST00000517151 304 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 HSPE1P20-201ENST00000538133 289 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.52□□□□□ -2.01
SNED1Q8TER0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.52□□□□□ -2.01
SNED1Q8TER0 MIR5002-201ENST00000584713 97 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.52□□□□□ -2.01
SNED1Q8TER0 AC018889.1-201ENST00000605372 397 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 AC002044.1-201ENST00000606707 158 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
SNED1Q8TER0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SNED1Q8TER0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SNED1Q8TER0 AC091812.1-201ENST00000432235 1948 ntBASIC2.52□□□□□ -2.01
SNED1Q8TER0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SNED1Q8TER0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SNED1Q8TER0 Y_RNA.151-201ENST00000363566 112 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RNU6-99P-201ENST00000364721 107 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 Y_RNA.480-201ENST00000384364 102 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 Y_RNA.574-201ENST00000384766 95 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RNU6-101P-201ENST00000410323 104 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 UBE2V1P4-201ENST00000425374 344 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 USP9YP16-201ENST00000430287 407 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.51□□□□□ -2.01
SNED1Q8TER0 AL714022.1-201ENST00000439897 151 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 USP9YP23-201ENST00000455085 407 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 AC087588.1-201ENST00000462203 316 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RPS27P26-201ENST00000494583 239 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 AC116655.1-201ENST00000508324 901 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RNU6-928P-201ENST00000516876 104 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 Y_RNA.721-201ENST00000517207 102 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SNED1Q8TER0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.51□□□□□ -2.01
SNED1Q8TER0 GNAI2P1-201ENST00000541815 315 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.51□□□□□ -2.01
SNED1Q8TER0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
SNED1Q8TER0 AC113195.1-201ENST00000579952 141 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 MIR4781-201ENST00000585250 76 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RPL23AP88-201ENST00000605759 454 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 MIR15A-201ENST00000607334 83 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.51□□□□□ -2.01
SNED1Q8TER0 AC007785.2-201ENST00000598627 1916 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SNED1Q8TER0 Y_RNA.153-201ENST00000363615 91 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RNU6-1059P-201ENST00000363752 98 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RNU6-266P-201ENST00000364225 107 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RNU1-115P-201ENST00000365329 160 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 Y_RNA.424-201ENST00000384063 103 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 MIR627-201ENST00000384979 97 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 MT-TR-201ENST00000387439 65 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 MIR767-201ENST00000390228 109 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RPL21P75-201ENST00000396599 483 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RPL21P28-201ENST00000401418 483 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RNU2-23P-201ENST00000410545 195 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SNED1Q8TER0 AL358453.1-201ENST00000422522 250 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 AL358075.3-201ENST00000426289 226 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.51□□□□□ -2.01
SNED1Q8TER0 U8.20-201ENST00000459445 131 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RNU7-138P-201ENST00000459479 64 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RPL21P39-201ENST00000463605 483 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.51□□□□□ -2.01
SNED1Q8TER0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.51□□□□□ -2.01
SNED1Q8TER0 AC087190.1-201ENST00000484462 480 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 AC093591.1-201ENST00000491435 481 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RPL21P16-201ENST00000495531 483 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 SEM1P1-201ENST00000506694 209 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 RNA5SP291-201ENST00000517222 105 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 HSBP1P1-201ENST00000555205 166 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 AP000787.2-201ENST00000604432 568 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 PRR13P7-201ENST00000605538 430 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 AL442067.1-201ENST00000613261 223 ntBASIC2.51□□□□□ -2.01
SNED1Q8TER0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.51□□□□□ -2.01
SNED1Q8TER0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNED1Q8TER0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNED1Q8TER0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNED1Q8TER0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
SNED1Q8TER0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.5□□□□□ -2.01
SNED1Q8TER0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SNED1Q8TER0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNED1Q8TER0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SNED1Q8TER0 Y_RNA.796-201ENST00000364268 102 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 RNU6-1303P-201ENST00000364841 107 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 Y_RNA.799-201ENST00000364992 102 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 Y_RNA.355-201ENST00000365462 98 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 RNU6-842P-201ENST00000384269 107 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 MIR517A-201ENST00000385001 87 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 RNU6-817P-201ENST00000391083 104 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 SNORA26.7-201ENST00000391288 122 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 AC009310.1-201ENST00000414414 451 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 AC092047.1-201ENST00000424997 240 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.5□□□□□ -2.01
SNED1Q8TER0 RPL21P2-201ENST00000440049 481 ntBASIC2.5□□□□□ -2.01
SNED1Q8TER0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.5□□□□□ -2.01
SNED1Q8TER0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms