Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU6-1090P-201ENST00000364065 94 ntBASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU6-378P-201ENST00000384324 107 ntBASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU6-325P-201ENST00000411132 105 ntBASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 AL158823.1-201ENST00000418441 478 ntBASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 BX510359.4-201ENST00000423750 193 ntBASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 AMD1P1-201ENST00000457220 922 ntBASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 AC021146.2-201ENST00000504736 556 ntBASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 KRTAP13-6P-201ENST00000508999 371 ntBASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 MIR449C-201ENST00000516047 92 ntBASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU2-44P-201ENST00000516795 194 ntBASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 RNA5SP490-201ENST00000517141 136 ntBASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 AC026371.1-201ENST00000551867 419 ntBASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 ANP32BP3-201ENST00000559213 706 ntBASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2□□□□□ -2.09
TRAF3IP1Q8TDR0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 SNORD115-3-201ENST00000363100 82 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 Y_RNA.100-201ENST00000363141 102 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 Y_RNA.373-201ENST00000365600 103 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 Y_RNA.554-201ENST00000384672 102 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 SUMO2P12-201ENST00000405924 140 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU2-20P-201ENST00000410425 191 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU6-373P-201ENST00000411247 98 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 ZNF885P-201ENST00000420174 1098 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 MTND3P9-201ENST00000429526 346 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU7-66P-201ENST00000459469 62 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 FAM206BP-201ENST00000510179 541 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 SNRPGP19-201ENST00000603826 189 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 AC012557.2-201ENST00000605919 418 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 MIR8076-201ENST00000611401 83 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 AC005296.1-201ENST00000616145 209 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 AC024614.3-201ENST00000637860 256 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.99□□□□□ -2.09
TRAF3IP1Q8TDR0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU5B-2P-201ENST00000363036 113 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 U8.2-201ENST00000363156 134 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU6-1286P-201ENST00000383871 107 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 Y_RNA.450-201ENST00000384198 113 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU11-3P-201ENST00000391111 133 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 RPS26P42-201ENST00000413485 326 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 HMGN2P3-201ENST00000433603 273 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 USP9YP28-201ENST00000435142 589 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 HMGN2P5-201ENST00000436882 273 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 FTH1P25-201ENST00000447665 469 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 Y_RNA.655-201ENST00000515919 96 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 MTND1P35-201ENST00000526739 508 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 AP005639.2-201ENST00000527592 928 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 FGF7P1-201ENST00000582820 288 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 AC005034.5-201ENST00000604219 466 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 CTHRC1P1-201ENST00000605383 469 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 AL022345.1-201ENST00000607292 135 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 RMST_3.1-201ENST00000611651 109 ntBASIC1.98□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU1-76P-201ENST00000362903 159 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 SNORA29-201ENST00000384183 140 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU6-784P-201ENST00000384330 106 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 Y_RNA.516-201ENST00000384541 124 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU6-160P-201ENST00000384591 107 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU6-332P-201ENST00000391193 108 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 MIR208B-201ENST00000401172 77 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU2-41P-201ENST00000410991 178 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 VN1R36P-201ENST00000414936 291 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 AC123900.1-201ENST00000420390 96 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 MTND1P34-201ENST00000438556 671 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 RNU1-131P-201ENST00000458943 161 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 RN7SL274P-201ENST00000492268 272 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 AC091435.1-201ENST00000505442 584 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 AL133215.3-201ENST00000609801 448 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 RMST_6.1-201ENST00000611980 203 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 AL773524.1-201ENST00000614065 229 ntBASIC1.97□□□□□ -2.09
TRAF3IP1Q8TDR0 SNORA8-201ENST00000384574 139 ntBASIC1.96□□□□□ -2.1
TRAF3IP1Q8TDR0 AC019129.1-201ENST00000403786 261 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 211.6 ms