Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SNORA36A-201ENST00000384221 132 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-790P-201ENST00000384479 105 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-831P-201ENST00000384548 107 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 MIR518A2-201ENST00000384966 87 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 MIR29B2-201ENST00000385055 81 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 RPL30P16-201ENST00000419341 429 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 RPL23AP95-201ENST00000426806 265 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AC078809.1-201ENST00000427601 140 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AC027124.2-201ENST00000428249 105 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 IFNA20P-201ENST00000436840 528 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AC108938.1-201ENST00000451204 136 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 PRELID3BP1-201ENST00000457142 540 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AC104564.1-201ENST00000493028 407 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 MTCO1P29-201ENST00000496868 288 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AC016632.1-201ENST00000503994 196 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-991P-201ENST00000516168 107 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AP005660.1-201ENST00000522972 293 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AC022616.8-201ENST00000533569 253 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 MIR3136-201ENST00000583498 78 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AC018638.8-201ENST00000588755 281 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 SNRPGP17-201ENST00000603780 214 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AL034555.1-201ENST00000604816 211 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AL356157.2-201ENST00000605122 111 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 AL033523.1-201ENST00000605153 153 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 BNIP3P10-201ENST00000605360 577 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 MIR3976-201ENST00000606807 139 ntBASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CCDC71LQ8N9Z2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 Y_RNA.212-201ENST00000364177 102 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 RNU4-56P-201ENST00000364700 142 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 SNORD116-11-201ENST00000383882 92 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-95P-201ENST00000384697 107 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 RN7SKP61-201ENST00000410642 295 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AL158823.1-201ENST00000418441 478 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AL133396.1-201ENST00000432048 687 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 USP9YP28-201ENST00000435142 589 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 MTND4LP16-201ENST00000440828 295 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 FGF7P6-202ENST00000451282 293 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 MTND1P11-201ENST00000456661 876 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 RPS29P27-201ENST00000463711 170 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AC114801.2-201ENST00000503825 781 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AC022447.4-201ENST00000504053 364 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AC018710.1-201ENST00000506509 158 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 RNU4-49P-201ENST00000516080 140 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-358P-201ENST00000516564 75 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-1088P-201ENST00000516850 104 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 RN7SKP256-201ENST00000517201 314 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 HSPE1P18-201ENST00000517602 280 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AP005639.2-201ENST00000527592 928 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 MIR4435-1-201ENST00000582552 80 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AC018889.1-201ENST00000605372 397 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AC025754.2-201ENST00000606491 432 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AL773524.1-201ENST00000614065 229 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 AL136360.1-201ENST00000503377 1900 ntBASIC1.64□□□□□ -2.15
CCDC71LQ8N9Z2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AC092268.1-201ENST00000342691 405 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 Y_RNA.123-201ENST00000363338 102 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-142P-201ENST00000384019 107 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-1013P-201ENST00000384180 107 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-611P-201ENST00000384276 104 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AL356776.1-201ENST00000406574 447 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AC009963.1-201ENST00000417265 157 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 BX510359.4-201ENST00000423750 193 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 Z82205.1-201ENST00000428456 297 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 MTND1P2-201ENST00000430604 821 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 PCMTD1P1-201ENST00000455560 355 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AC130509.1-201ENST00000464158 433 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 RPL23AP94-201ENST00000512518 302 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-864P-201ENST00000516256 108 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AC026464.5-201ENST00000562497 722 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 MIR4298-201ENST00000584380 73 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AC060780.3-201ENST00000589464 80 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms