Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CENPCP1-201ENST00000533085 2578 ntBASIC3.52□□□□□ -1.85
ATG4DQ86TL0 MAPK10-373ENST00000641983 6772 ntBASIC3.52□□□□□ -1.85
ATG4DQ86TL0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATG4DQ86TL0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ATG4DQ86TL0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATG4DQ86TL0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATG4DQ86TL0 SNORD73B-201ENST00000364394 72 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 RNU6-1164P-201ENST00000364428 107 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 SNORD87-201ENST00000364849 89 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 Y_RNA.368-201ENST00000365547 113 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 RNU1-73P-201ENST00000383971 164 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 MIR208B-201ENST00000401172 77 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 AL591034.1-201ENST00000407447 340 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.51□□□□□ -1.85
ATG4DQ86TL0 Z82209.1-201ENST00000422141 2135 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 RPL26P9-201ENST00000457466 433 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 RNU6-537P-201ENST00000517277 103 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 AC006199.1-201ENST00000548728 219 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.51□□□□□ -1.85
ATG4DQ86TL0 MIR4724-201ENST00000579485 89 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 AC120024.3-201ENST00000603167 156 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 FTX_3.1-201ENST00000610451 147 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 MIR486-1-201ENST00000612171 68 ntBASIC3.51□□□□□ -1.85
ATG4DQ86TL0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
ATG4DQ86TL0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.51□□□□□ -1.85
ATG4DQ86TL0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
ATG4DQ86TL0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATG4DQ86TL0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.51□□□□□ -1.85
ATG4DQ86TL0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
ATG4DQ86TL0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
ATG4DQ86TL0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4DQ86TL0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4DQ86TL0 AC073073.2-201ENST00000609827 2578 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 Y_RNA.310-201ENST00000365063 113 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 RNU6-32P-201ENST00000383948 107 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 RNU6-13P-201ENST00000384248 107 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 RNU1-89P-201ENST00000384592 164 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 RNU6-12P-201ENST00000384604 107 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 RNU6-41P-201ENST00000384741 107 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 RNU6-710P-201ENST00000410424 105 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 RN7SKP202-201ENST00000410439 330 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 RN7SKP284-201ENST00000411002 343 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 Y_RNA.622-201ENST00000411091 108 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 AL158147.1-201ENST00000443970 75 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.5□□□□□ -1.85
ATG4DQ86TL0 snoU13.24-201ENST00000458998 104 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 RNU6-581P-201ENST00000516214 105 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.5□□□□□ -1.85
ATG4DQ86TL0 HSPE1P5-201ENST00000561489 272 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 MIR4429-201ENST00000580105 73 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.5□□□□□ -1.85
ATG4DQ86TL0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4DQ86TL0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ATG4DQ86TL0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4DQ86TL0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.5□□□□□ -1.85
ATG4DQ86TL0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4DQ86TL0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
ATG4DQ86TL0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4DQ86TL0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 MIR367-201ENST00000362299 68 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 U8.1-201ENST00000362843 134 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 U3.9-201ENST00000363823 204 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 RNA5SP97-201ENST00000365006 84 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 RNU6-1280P-201ENST00000365211 107 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 MIR548A3-201ENST00000385297 97 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 U3.26-201ENST00000391236 204 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 HMGN2P8-201ENST00000391458 268 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 HMGN2P30-201ENST00000423237 256 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 SNRPGP5-201ENST00000456003 220 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 snoU13.4-201ENST00000458916 104 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 TRBV12-2-201ENST00000489763 344 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 SNORA31.8-201ENST00000516327 108 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 Y_RNA.677-201ENST00000516401 85 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 AL356575.1-201ENST00000603008 283 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 AL162713.1-201ENST00000604480 262 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 AL137849.1-201ENST00000604767 169 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 AC112200.1-201ENST00000625015 234 ntBASIC3.49□□□□□ -1.85
ATG4DQ86TL0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG4DQ86TL0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.48□□□□□ -1.85
ATG4DQ86TL0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms