Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AC004584.2-201ENST00000570407 410 ntBASIC2.63□□□□□ -1.99
USP43Q70EL4 AC107294.1-201ENST00000609524 467 ntBASIC2.63□□□□□ -1.99
USP43Q70EL4 AL590240.4-201ENST00000616908 390 ntBASIC2.63□□□□□ -1.99
USP43Q70EL4 AC007318.2-201ENST00000620999 243 ntBASIC2.63□□□□□ -1.99
USP43Q70EL4 MIR622-201ENST00000638396 96 ntBASIC2.63□□□□□ -1.99
USP43Q70EL4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USP43Q70EL4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
USP43Q70EL4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
USP43Q70EL4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.63□□□□□ -1.99
USP43Q70EL4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USP43Q70EL4 SNORD81.1-201ENST00000363064 77 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 RNA5SP139-201ENST00000364340 117 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 RNU6-47P-201ENST00000383866 107 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 RNU1-138P-201ENST00000384093 164 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 RNU6-1081P-201ENST00000384537 107 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 SNORA44-201ENST00000384584 132 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 Y_RNA.533-201ENST00000384596 114 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 Y_RNA.541-201ENST00000384640 113 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 MIR301A-201ENST00000385261 86 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 RPS4XP3-201ENST00000398541 413 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 RPS29P13-201ENST00000402041 169 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 Y_RNA.592-201ENST00000410274 109 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 RN7SKP51-201ENST00000410781 304 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 Z85995.1-201ENST00000415547 335 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.62□□□□□ -1.99
USP43Q70EL4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.62□□□□□ -1.99
USP43Q70EL4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.62□□□□□ -1.99
USP43Q70EL4 FABP5P15-201ENST00000453566 214 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 RNA5SP310-201ENST00000459084 116 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 AC103975.1-201ENST00000482506 483 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 AL359273.1-201ENST00000510918 627 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 SNORA70.16-201ENST00000516390 95 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 AC144568.1-201ENST00000520139 137 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.62□□□□□ -1.99
USP43Q70EL4 AP002392.1-201ENST00000537692 208 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USP43Q70EL4 MIR4446-201ENST00000578505 67 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 MIR4300-201ENST00000581016 96 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.62□□□□□ -1.99
USP43Q70EL4 AC011921.3-201ENST00000605540 361 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 AC002064.3-201ENST00000623448 346 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 AC018692.3-201ENST00000623929 123 ntBASIC2.62□□□□□ -1.99
USP43Q70EL4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.61□□□□□ -1.99
USP43Q70EL4 DEFB108F-201ENST00000344638 222 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 Y_RNA.33-201ENST00000362591 102 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 Y_RNA.54-201ENST00000362766 105 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 RNU6-1290P-201ENST00000362957 109 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 Y_RNA.199-201ENST00000364014 102 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 RNY4P28-201ENST00000365281 93 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 U8.8-201ENST00000365399 135 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 RNU6-395P-201ENST00000365662 106 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 SNORA7.4-201ENST00000384249 137 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 MIR625-201ENST00000385047 85 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 AL592148.1-201ENST00000413568 445 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 AC096920.1-201ENST00000423991 241 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.61□□□□□ -1.99
USP43Q70EL4 SCARNA15.2-201ENST00000516409 127 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 SNORA25.14-201ENST00000516481 132 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 Y_RNA.713-201ENST00000517013 96 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 AC022559.1-201ENST00000520905 205 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 MIR5696-201ENST00000578474 85 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.61□□□□□ -1.99
USP43Q70EL4 RPS29P30-201ENST00000600975 111 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 AL121917.1-203ENST00000605534 577 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.61□□□□□ -1.99
USP43Q70EL4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.61□□□□□ -1.99
USP43Q70EL4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USP43Q70EL4 OR4G2P-202ENST00000641004 1759 ntBASIC2.61□□□□□ -1.99
USP43Q70EL4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USP43Q70EL4 RNU1-76P-201ENST00000362903 159 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 SNORD50.1-201ENST00000362987 71 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 Y_RNA.122-201ENST00000363331 96 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 MIR512-1-201ENST00000384913 84 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 SNORD67-201ENST00000390833 111 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 FO393413.1-201ENST00000402892 195 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 RNU6-394P-201ENST00000410735 107 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.6□□□□□ -1.99
USP43Q70EL4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.6□□□□□ -1.99
USP43Q70EL4 NDUFB4P7-201ENST00000423198 363 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 AL031183.1-201ENST00000457667 207 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 RPS20P22-201ENST00000473700 357 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 AL049874.1-201ENST00000489560 388 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.6□□□□□ -1.99
USP43Q70EL4 RNU6-143P-201ENST00000516942 93 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.6□□□□□ -1.99
USP43Q70EL4 MRPS36P4-201ENST00000534436 298 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 MIR3976-201ENST00000606807 139 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.6□□□□□ -1.99
USP43Q70EL4 AC099654.7-201ENST00000635788 2127 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USP43Q70EL4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USP43Q70EL4 ZNF271P-202ENST00000465539 1970 ntBASIC2.6□□□□□ -1.99
USP43Q70EL4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.59□□□□□ -1.99
USP43Q70EL4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USP43Q70EL4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
USP43Q70EL4 MIR412-201ENST00000362142 91 ntBASIC2.59□□□□□ -1.99
USP43Q70EL4 RNU6-595P-201ENST00000363944 107 ntBASIC2.59□□□□□ -1.99
USP43Q70EL4 RNU6-1317P-201ENST00000364582 104 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms