Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.61□□□□□ -2.15
NIPAL3Q6P499 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.61□□□□□ -2.15
NIPAL3Q6P499 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.61□□□□□ -2.15
NIPAL3Q6P499 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.61□□□□□ -2.15
NIPAL3Q6P499 snoU13.15-201ENST00000459407 104 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 snoU13.26-201ENST00000459452 105 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 U8.21-201ENST00000459536 136 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 SRRM1P2-201ENST00000464531 1192 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.61□□□□□ -2.15
NIPAL3Q6P499 RPS23P5-201ENST00000495419 428 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 RPL23AP63-201ENST00000498752 471 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 YWHAEP4-201ENST00000505390 198 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 AC107393.1-201ENST00000512403 346 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 AC025465.4-201ENST00000513422 638 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 RNU6-405P-201ENST00000516637 110 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 SUMO2P18-201ENST00000518873 252 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 MTND2P38-201ENST00000522536 667 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 AC104576.1-201ENST00000524225 88 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 AP005597.4-201ENST00000526762 229 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 MIR3122-201ENST00000577243 73 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.61□□□□□ -2.15
NIPAL3Q6P499 MIR3618-201ENST00000580330 88 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.61□□□□□ -2.15
NIPAL3Q6P499 AL158209.2-201ENST00000619266 216 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 AC073534.2-201ENST00000620377 381 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 AC005858.4-201ENST00000623191 700 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 MIR6863-201ENST00000636112 90 ntBASIC1.61□□□□□ -2.15
NIPAL3Q6P499 MTND5P26-201ENST00000426018 1752 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 Y_RNA.378-201ENST00000365652 113 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
NIPAL3Q6P499 ARL5AP1-201ENST00000418991 388 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 RPL31P63-201ENST00000422565 375 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 MTND3P9-201ENST00000429526 346 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.6□□□□□ -2.15
NIPAL3Q6P499 AC010095.1-201ENST00000443543 144 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.6□□□□□ -2.15
NIPAL3Q6P499 RPL9P9-202ENST00000466501 579 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.6□□□□□ -2.15
NIPAL3Q6P499 Y_RNA.654-201ENST00000497848 106 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 AC114801.2-201ENST00000503825 781 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 AC091885.1-201ENST00000506658 268 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 AC097473.1-201ENST00000508142 408 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 AC008834.1-201ENST00000511612 175 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 SNORA19.2-201ENST00000516013 114 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.6□□□□□ -2.15
NIPAL3Q6P499 AC016256.1-201ENST00000547971 354 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 AL118558.2-201ENST00000556294 238 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 MIR3198-2-201ENST00000577868 80 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 AC064836.2-201ENST00000609491 462 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 AL121757.2-201ENST00000611223 313 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.6□□□□□ -2.15
NIPAL3Q6P499 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.6□□□□□ -2.15
NIPAL3Q6P499 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.6□□□□□ -2.15
NIPAL3Q6P499 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
NIPAL3Q6P499 RNU1-76P-201ENST00000362903 159 ntBASIC1.59□□□□□ -2.15
NIPAL3Q6P499 RNU6-1085P-201ENST00000363576 107 ntBASIC1.59□□□□□ -2.15
NIPAL3Q6P499 RNU6-1329P-201ENST00000365664 107 ntBASIC1.59□□□□□ -2.15
NIPAL3Q6P499 MIR9-3-201ENST00000385084 90 ntBASIC1.59□□□□□ -2.15
NIPAL3Q6P499 MIR30A-201ENST00000385092 71 ntBASIC1.59□□□□□ -2.15
NIPAL3Q6P499 SNORA12.2-201ENST00000391040 156 ntBASIC1.59□□□□□ -2.15
NIPAL3Q6P499 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.59□□□□□ -2.15
NIPAL3Q6P499 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.59□□□□□ -2.15
NIPAL3Q6P499 AC112492.4-201ENST00000456549 352 ntBASIC1.59□□□□□ -2.15
NIPAL3Q6P499 RPS29P11-201ENST00000496507 171 ntBASIC1.59□□□□□ -2.15
NIPAL3Q6P499 RNU6-295P-201ENST00000516901 104 ntBASIC1.59□□□□□ -2.15
NIPAL3Q6P499 SUB1P4-201ENST00000566062 339 ntBASIC1.59□□□□□ -2.15
NIPAL3Q6P499 MIR5094-201ENST00000578766 85 ntBASIC1.59□□□□□ -2.15
NIPAL3Q6P499 MIR5692C1-201ENST00000585309 91 ntBASIC1.59□□□□□ -2.15
NIPAL3Q6P499 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.59□□□□□ -2.15
NIPAL3Q6P499 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.59□□□□□ -2.15
NIPAL3Q6P499 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
NIPAL3Q6P499 MIR340-201ENST00000362125 95 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 Y_RNA.132-201ENST00000363421 102 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 RNU4-20P-201ENST00000365601 151 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 RNU6-259P-201ENST00000383999 107 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 SNORD116-1-201ENST00000384335 95 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 U8.13-201ENST00000390842 128 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 MIR1289-2-201ENST00000408360 111 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 TIMM9P3-201ENST00000428659 274 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 AC007395.1-201ENST00000451333 677 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 HMGN2P23-201ENST00000456759 269 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 AC016925.1-201ENST00000458303 298 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 snoU13.6-201ENST00000458785 104 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 AC010409.1-201ENST00000487382 476 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.58□□□□□ -2.16
NIPAL3Q6P499 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.58□□□□□ -2.16
NIPAL3Q6P499 SNORA31.17-201ENST00000516953 127 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.58□□□□□ -2.16
NIPAL3Q6P499 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.58□□□□□ -2.16
NIPAL3Q6P499 HSBP1P1-201ENST00000555205 166 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.58□□□□□ -2.16
NIPAL3Q6P499 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.58□□□□□ -2.16
NIPAL3Q6P499 AL158827.2-201ENST00000602494 330 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 AC092807.2-201ENST00000609367 243 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 MIR6845-201ENST00000613182 61 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 AC083806.3-201ENST00000614016 455 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 AC084768.2-201ENST00000622736 221 ntBASIC1.58□□□□□ -2.16
NIPAL3Q6P499 AL691447.3-201ENST00000635020 330 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms