Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AL451074.5-201ENST00000415894 435 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC004386.2-201ENST00000441858 148 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 U8.18-201ENST00000459285 133 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 snoU13.14-201ENST00000459372 104 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 AP002884.2-201ENST00000471647 395 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU6-436P-201ENST00000516171 114 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU2-12P-201ENST00000517216 168 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 DEFB131C-201ENST00000528817 165 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 EIF4A1P12-201ENST00000551910 141 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 MIR5692C2-201ENST00000577959 77 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC004832.4-201ENST00000608952 331 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 AL138880.2-201ENST00000616214 239 ntBASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DQA1Q5Y7H0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 MIR613-201ENST00000385248 95 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 PTMAP2-201ENST00000397627 327 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 AL357075.1-201ENST00000404107 726 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 U3.39-201ENST00000408569 239 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 U3.40-201ENST00000408706 208 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU5E-9P-201ENST00000411164 104 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 AL133547.1-201ENST00000448546 220 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 Y_RNA.637-201ENST00000459424 114 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC112771.1-201ENST00000463581 102 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 RPL31P41-201ENST00000477967 372 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC145146.1-201ENST00000496370 254 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC034105.4-201ENST00000568304 277 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC012493.2-201ENST00000595083 291 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC006380.1-201ENST00000603598 186 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU1-30P-201ENST00000606575 163 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 AL121772.2-201ENST00000614331 297 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC005562.2-201ENST00000618264 111 ntBASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DQA1Q5Y7H0 AL353746.1-201ENST00000566293 6881 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 AL161912.2-201ENST00000565707 3007 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 U3.9-201ENST00000363823 204 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU6-704P-201ENST00000364162 103 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 SNORA18.2-201ENST00000383865 132 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU6-1264P-201ENST00000383891 107 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 MIR186-201ENST00000384988 86 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 SNORD105B-201ENST00000458770 79 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 U8.19-201ENST00000459095 133 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU1-95P-201ENST00000516357 160 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU1-128P-201ENST00000516704 160 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU1-117P-201ENST00000517041 158 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 MIR5006-201ENST00000583027 110 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC244505.7-201ENST00000599675 272 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC110741.2-201ENST00000605278 268 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 TCL6_2.1-201ENST00000615162 119 ntBASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HLA-DQA1Q5Y7H0 PWAR6-201ENST00000552334 4618 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNA5SP322-201ENST00000363617 119 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNA5SP51-201ENST00000364750 119 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 Y_RNA.571-201ENST00000384753 98 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU6-1248P-201ENST00000391096 64 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNA5SP504-201ENST00000410676 117 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 ATP5A1P2-201ENST00000412323 255 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC006989.1-201ENST00000427212 131 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 RNU2-44P-201ENST00000516795 194 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 SUMO2P18-201ENST00000518873 252 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 AL391813.1-201ENST00000603098 260 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 SNORD11B-201ENST00000607707 90 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 AP003355.3-201ENST00000623465 114 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 AL034408.1-202ENST00000636088 415 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 AC010680.1-201ENST00000590024 3590 ntBASIC3.36□□□□□ -1.87
HLA-DQA1Q5Y7H0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms