Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ANP32BP3-201ENST00000559213 706 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 HMGB1P33-201ENST00000563485 527 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 MIR4713-201ENST00000582691 75 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 AC064836.2-201ENST00000609491 462 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 Y_RNA.3-201ENST00000362331 103 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 RNA5SP276-201ENST00000362580 94 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 RNU6-623P-201ENST00000363143 105 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 Y_RNA.373-201ENST00000365600 103 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 MIR1323-201ENST00000408090 73 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 AL590135.1-201ENST00000422215 156 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 AC019205.3-201ENST00000424573 156 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 RPS15AP10-201ENST00000432472 382 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 AC016700.2-201ENST00000446011 156 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 RNU7-138P-201ENST00000459479 64 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 AC015911.1-201ENST00000495111 156 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 AP005597.4-201ENST00000526762 229 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 CYCSP27-201ENST00000527643 293 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 AP000763.2-201ENST00000540641 163 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 MIR4781-201ENST00000585250 76 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 MIR5692C1-201ENST00000585309 91 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 BNIP3P16-201ENST00000589779 534 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 AC068944.2-201ENST00000610373 403 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 SNORD98-201ENST00000636377 67 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 OR4G1P-203ENST00000641984 1631 ntBASIC1.95□□□□□ -2.1
SHROOM1Q2M3G4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 RNU6-1252P-201ENST00000363054 104 ntBASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 RNU6-1285P-201ENST00000363480 105 ntBASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 RNU6-546P-201ENST00000383991 107 ntBASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 Y_RNA.615-201ENST00000410769 117 ntBASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 AC244670.1-201ENST00000436879 112 ntBASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 RNU7-95P-201ENST00000459222 64 ntBASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 MIR3941-201ENST00000582572 103 ntBASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 AL078605.1-201ENST00000603529 500 ntBASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 MIR502-201ENST00000606349 86 ntBASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 RNU6-89P-201ENST00000606519 100 ntBASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 AC103705.1-201ENST00000619013 241 ntBASIC1.94□□□□□ -2.1
SHROOM1Q2M3G4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 RNU4-15P-201ENST00000362613 141 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 SNORA36A-201ENST00000384221 132 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 Y_RNA.504-201ENST00000384481 104 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 RPS29P13-201ENST00000402041 169 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 RNU2-48P-201ENST00000410694 191 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 RNU6-321P-201ENST00000410912 106 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 VN1R36P-201ENST00000414936 291 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 SNAP23P1-201ENST00000433229 246 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 SEPT14P3-201ENST00000439401 183 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 AL732372.2-207ENST00000445840 183 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 SEPT14P2-201ENST00000453405 183 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 Y_RNA.654-201ENST00000497848 106 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 AC079140.5-201ENST00000507882 310 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 AC008834.1-201ENST00000511612 175 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 SEPT14P4-201ENST00000513445 186 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 SNORA19.2-201ENST00000516013 114 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 RNU6-1332P-201ENST00000516666 104 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 FO082796.1-201ENST00000523795 183 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 COPS8P3-201ENST00000526024 482 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 AC007375.1-201ENST00000554513 578 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 AL162413.1-201ENST00000603198 110 ntBASIC1.93□□□□□ -2.1
SHROOM1Q2M3G4 AC006026.1-201ENST00000444025 1803 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 RNU1-42P-201ENST00000364033 160 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 Y_RNA.231-201ENST00000364358 102 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 SNORD32A-201ENST00000364805 84 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 Y_RNA.516-201ENST00000384541 124 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 SNORD116-4-201ENST00000384733 96 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 MIR934-201ENST00000401241 83 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 MTCO1P20-201ENST00000425366 358 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 MTND3P9-201ENST00000429526 346 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 RNU6-1208P-201ENST00000459588 107 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 AC145146.1-201ENST00000496370 254 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 AC005840.1-201ENST00000498412 377 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 AC008628.2-201ENST00000502605 298 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 RNU6-1069P-201ENST00000516612 133 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 MTND1P35-201ENST00000526739 508 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 MIR3935-201ENST00000583472 104 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 AL034555.1-201ENST00000604816 211 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms