Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDH1Q08174 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 AF117829.1-206ENST00000621883 3802 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.8□□□□□ -1.8
PCDH1Q08174 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDH1Q08174 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDH1Q08174 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH1Q08174 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH1Q08174 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH1Q08174 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH1Q08174 RNU6-1290P-201ENST00000362957 109 ntBASIC3.79□□□□□ -1.8
PCDH1Q08174 RNU6-103P-201ENST00000363686 107 ntBASIC3.79□□□□□ -1.8
PCDH1Q08174 RNU6-1210P-201ENST00000363775 107 ntBASIC3.79□□□□□ -1.8
PCDH1Q08174 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.79□□□□□ -1.8
PCDH1Q08174 RNU6-710P-201ENST00000410424 105 ntBASIC3.79□□□□□ -1.8
PCDH1Q08174 HMGN2P20-201ENST00000437531 273 ntBASIC3.79□□□□□ -1.8
PCDH1Q08174 RPS3P1-201ENST00000456781 192 ntBASIC3.79□□□□□ -1.8
PCDH1Q08174 AC146507.2-201ENST00000460608 476 ntBASIC3.79□□□□□ -1.8
PCDH1Q08174 AC091153.1-201ENST00000466297 402 ntBASIC3.79□□□□□ -1.8
PCDH1Q08174 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDH1Q08174 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH1Q08174 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDH1Q08174 MIR4744-201ENST00000581563 82 ntBASIC3.79□□□□□ -1.8
PCDH1Q08174 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH1Q08174 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDH1Q08174 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDH1Q08174 AF127577.6-201ENST00000623352 2191 ntBASIC3.79□□□□□ -1.8
PCDH1Q08174 MAPK10-373ENST00000641983 6772 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH1Q08174 Y_RNA.243-201ENST00000364481 109 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 RNU6-818P-201ENST00000364837 108 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 U1.1-201ENST00000384101 164 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 SNORA72.4-201ENST00000384174 132 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 MIR569-201ENST00000385228 96 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 MIR23A-201ENST00000385245 73 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 RNU6-750P-201ENST00000390946 107 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH1Q08174 RNU6-735P-201ENST00000410612 107 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 AL159169.1-201ENST00000421119 127 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 TBCAP1-201ENST00000436520 327 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH1Q08174 AL500522.2-201ENST00000448562 343 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 PPIAP15-201ENST00000479662 484 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 AC026726.1-201ENST00000512859 601 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 RNU2-44P-201ENST00000516795 194 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDH1Q08174 AC090877.1-201ENST00000561418 344 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 AC091167.4-201ENST00000605079 184 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 AC069294.1-201ENST00000608397 350 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 AL138880.2-201ENST00000616214 239 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDH1Q08174 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PCDH1Q08174 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDH1Q08174 AC134026.1-201ENST00000623249 2239 ntBASIC3.78□□□□□ -1.8
PCDH1Q08174 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDH1Q08174 RNU6-655P-201ENST00000362858 107 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 SNORA22C-201ENST00000384614 134 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 SNORA8.3-201ENST00000384679 139 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 U8.12-201ENST00000384701 133 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 RNU6-1168P-201ENST00000390831 104 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 RNU6-578P-201ENST00000390980 103 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDH1Q08174 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDH1Q08174 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDH1Q08174 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PCDH1Q08174 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDH1Q08174 RNU7-121P-201ENST00000516604 62 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 RNA5SP179-201ENST00000517284 121 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDH1Q08174 MIR4431-201ENST00000579990 94 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 VN1R85P-201ENST00000601587 426 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 AL391813.1-201ENST00000603098 260 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 AC006133.1-201ENST00000617106 264 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 AC034229.5-201ENST00000624258 185 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 AC244205.2-202ENST00000635781 342 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 AC068700.1-201ENST00000565862 3754 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDH1Q08174 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDH1Q08174 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDH1Q08174 TNPO1P3-201ENST00000436471 2662 ntBASIC3.77□□□□□ -1.81
PCDH1Q08174 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDH1Q08174 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDH1Q08174 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDH1Q08174 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDH1Q08174 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDH1Q08174 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDH1Q08174 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PCDH1Q08174 Y_RNA.293-201ENST00000364908 93 ntBASIC3.76□□□□□ -1.81
PCDH1Q08174 MIR626-201ENST00000385032 94 ntBASIC3.76□□□□□ -1.81
PCDH1Q08174 RNA5SP317-201ENST00000410176 116 ntBASIC3.76□□□□□ -1.81
PCDH1Q08174 RNA5SP311-201ENST00000411290 116 ntBASIC3.76□□□□□ -1.81
PCDH1Q08174 RHEBP3-201ENST00000411920 351 ntBASIC3.76□□□□□ -1.81
PCDH1Q08174 RNU7-170P-201ENST00000459303 61 ntBASIC3.76□□□□□ -1.81
PCDH1Q08174 RN7SL93P-201ENST00000463035 293 ntBASIC3.76□□□□□ -1.81
PCDH1Q08174 AC010409.1-201ENST00000487382 476 ntBASIC3.76□□□□□ -1.81
PCDH1Q08174 RNA5SP315-201ENST00000516340 116 ntBASIC3.76□□□□□ -1.81
PCDH1Q08174 RNA5SP312-201ENST00000517068 116 ntBASIC3.76□□□□□ -1.81
PCDH1Q08174 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDH1Q08174 AC025281.1-201ENST00000567026 265 ntBASIC3.76□□□□□ -1.81
PCDH1Q08174 AC090616.3-201ENST00000582184 217 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms