Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 snoU13.9-201ENST00000458927 103 ntBASIC1.49□□□□□ -2.17
CBX1P83916 HMGN1P13-201ENST00000505795 138 ntBASIC1.49□□□□□ -2.17
CBX1P83916 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.49□□□□□ -2.17
CBX1P83916 RNA5SP182-201ENST00000516064 82 ntBASIC1.49□□□□□ -2.17
CBX1P83916 SNORA14.1-201ENST00000516113 141 ntBASIC1.49□□□□□ -2.17
CBX1P83916 SNORA25.15-201ENST00000516487 89 ntBASIC1.49□□□□□ -2.17
CBX1P83916 SNORD60.2-201ENST00000516883 86 ntBASIC1.49□□□□□ -2.17
CBX1P83916 AP000873.5-201ENST00000533906 236 ntBASIC1.49□□□□□ -2.17
CBX1P83916 AC068338.1-201ENST00000565567 176 ntBASIC1.49□□□□□ -2.17
CBX1P83916 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.49□□□□□ -2.17
CBX1P83916 AC011494.1-201ENST00000596454 237 ntBASIC1.49□□□□□ -2.17
CBX1P83916 VN1R80P-201ENST00000597126 338 ntBASIC1.49□□□□□ -2.17
CBX1P83916 MIR502-201ENST00000606349 86 ntBASIC1.49□□□□□ -2.17
CBX1P83916 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CBX1P83916 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.49□□□□□ -2.17
CBX1P83916 MIR7843-201ENST00000622274 79 ntBASIC1.49□□□□□ -2.17
CBX1P83916 AC084768.2-201ENST00000622736 221 ntBASIC1.49□□□□□ -2.17
CBX1P83916 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.49□□□□□ -2.17
CBX1P83916 RNU6-296P-201ENST00000384608 107 ntBASIC1.48□□□□□ -2.17
CBX1P83916 RNU6-1158P-201ENST00000391167 107 ntBASIC1.48□□□□□ -2.17
CBX1P83916 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.48□□□□□ -2.17
CBX1P83916 SDAD1P3-201ENST00000427380 333 ntBASIC1.48□□□□□ -2.17
CBX1P83916 MTCO2P19-201ENST00000427513 598 ntBASIC1.48□□□□□ -2.17
CBX1P83916 AC015922.2-201ENST00000435593 184 ntBASIC1.48□□□□□ -2.17
CBX1P83916 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.48□□□□□ -2.17
CBX1P83916 UBE2V1P8-201ENST00000437166 265 ntBASIC1.48□□□□□ -2.17
CBX1P83916 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.48□□□□□ -2.17
CBX1P83916 ATP5J2P3-201ENST00000451550 258 ntBASIC1.48□□□□□ -2.17
CBX1P83916 RNU6-1037P-201ENST00000459571 107 ntBASIC1.48□□□□□ -2.17
CBX1P83916 RPL31P58-201ENST00000469001 379 ntBASIC1.48□□□□□ -2.17
CBX1P83916 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CBX1P83916 RNU6-612P-201ENST00000516909 102 ntBASIC1.48□□□□□ -2.17
CBX1P83916 AC007834.2-201ENST00000536310 343 ntBASIC1.48□□□□□ -2.17
CBX1P83916 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.48□□□□□ -2.17
CBX1P83916 HMGB1P33-201ENST00000563485 527 ntBASIC1.48□□□□□ -2.17
CBX1P83916 AC069114.2-201ENST00000604699 304 ntBASIC1.48□□□□□ -2.17
CBX1P83916 AC007684.1-201ENST00000609671 477 ntBASIC1.48□□□□□ -2.17
CBX1P83916 AC078883.4-201ENST00000623218 367 ntBASIC1.48□□□□□ -2.17
CBX1P83916 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.48□□□□□ -2.17
CBX1P83916 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.48□□□□□ -2.17
CBX1P83916 MTND4P23-201ENST00000447723 1363 ntBASIC1.47□□□□□ -2.17
CBX1P83916 AC091812.1-201ENST00000432235 1948 ntBASIC1.47□□□□□ -2.17
CBX1P83916 Y_RNA.67-201ENST00000362870 100 ntBASIC1.47□□□□□ -2.17
CBX1P83916 Y_RNA.132-201ENST00000363421 102 ntBASIC1.47□□□□□ -2.17
CBX1P83916 Y_RNA.255-201ENST00000364581 97 ntBASIC1.47□□□□□ -2.17
CBX1P83916 RNU6-1093P-201ENST00000391194 107 ntBASIC1.47□□□□□ -2.17
CBX1P83916 MIR1267-201ENST00000408723 78 ntBASIC1.47□□□□□ -2.17
CBX1P83916 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.47□□□□□ -2.17
CBX1P83916 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.47□□□□□ -2.17
CBX1P83916 snoU13.26-201ENST00000459452 105 ntBASIC1.47□□□□□ -2.17
CBX1P83916 AC010531.2-201ENST00000465012 153 ntBASIC1.47□□□□□ -2.17
CBX1P83916 RPL9P9-202ENST00000466501 579 ntBASIC1.47□□□□□ -2.17
CBX1P83916 RPS3AP17-201ENST00000472594 777 ntBASIC1.47□□□□□ -2.17
CBX1P83916 AC098862.1-201ENST00000504991 413 ntBASIC1.47□□□□□ -2.17
CBX1P83916 AC116337.1-201ENST00000509680 687 ntBASIC1.47□□□□□ -2.17
CBX1P83916 RPL39P5-202ENST00000512505 151 ntBASIC1.47□□□□□ -2.17
CBX1P83916 RN7SKP298-201ENST00000515950 94 ntBASIC1.47□□□□□ -2.17
CBX1P83916 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.47□□□□□ -2.17
CBX1P83916 MIR4422-201ENST00000581938 83 ntBASIC1.47□□□□□ -2.17
CBX1P83916 MIR4424-201ENST00000585257 86 ntBASIC1.47□□□□□ -2.17
CBX1P83916 AC087683.1-201ENST00000591187 441 ntBASIC1.47□□□□□ -2.17
CBX1P83916 MIR8081-201ENST00000611533 95 ntBASIC1.47□□□□□ -2.17
CBX1P83916 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.47□□□□□ -2.17
CBX1P83916 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.47□□□□□ -2.17
CBX1P83916 Z69908.1-201ENST00000622603 247 ntBASIC1.47□□□□□ -2.17
CBX1P83916 AC068205.3-201ENST00000636385 468 ntBASIC1.47□□□□□ -2.17
CBX1P83916 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CBX1P83916 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CBX1P83916 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CBX1P83916 Y_RNA.1-201ENST00000352915 104 ntBASIC1.46□□□□□ -2.18
CBX1P83916 Y_RNA.296-201ENST00000364930 108 ntBASIC1.46□□□□□ -2.18
CBX1P83916 MIR520A-201ENST00000384862 85 ntBASIC1.46□□□□□ -2.18
CBX1P83916 MIR1261-201ENST00000408659 82 ntBASIC1.46□□□□□ -2.18
CBX1P83916 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.46□□□□□ -2.18
CBX1P83916 EBAG9P1-201ENST00000418955 543 ntBASIC1.46□□□□□ -2.18
CBX1P83916 AL353193.1-201ENST00000421444 268 ntBASIC1.46□□□□□ -2.18
CBX1P83916 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.46□□□□□ -2.18
CBX1P83916 USP9YP28-201ENST00000435142 589 ntBASIC1.46□□□□□ -2.18
CBX1P83916 AC099677.2-201ENST00000436385 175 ntBASIC1.46□□□□□ -2.18
CBX1P83916 HMGB1P29-201ENST00000505659 499 ntBASIC1.46□□□□□ -2.18
CBX1P83916 RNU6-189P-201ENST00000516120 101 ntBASIC1.46□□□□□ -2.18
CBX1P83916 RNU6-295P-201ENST00000516901 104 ntBASIC1.46□□□□□ -2.18
CBX1P83916 RNU6-548P-201ENST00000517083 115 ntBASIC1.46□□□□□ -2.18
CBX1P83916 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.46□□□□□ -2.18
CBX1P83916 OSBPL9P5-201ENST00000542581 171 ntBASIC1.46□□□□□ -2.18
CBX1P83916 AC016256.1-201ENST00000547971 354 ntBASIC1.46□□□□□ -2.18
CBX1P83916 AP005136.1-201ENST00000579765 429 ntBASIC1.46□□□□□ -2.18
CBX1P83916 Z99497.2-201ENST00000603634 310 ntBASIC1.46□□□□□ -2.18
CBX1P83916 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CBX1P83916 RNU6-227P-201ENST00000362865 103 ntBASIC1.45□□□□□ -2.18
CBX1P83916 Y_RNA.381-201ENST00000365666 102 ntBASIC1.45□□□□□ -2.18
CBX1P83916 SNORA18.2-201ENST00000383865 132 ntBASIC1.45□□□□□ -2.18
CBX1P83916 SNORD116-8-201ENST00000384365 95 ntBASIC1.45□□□□□ -2.18
CBX1P83916 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.45□□□□□ -2.18
CBX1P83916 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.45□□□□□ -2.18
CBX1P83916 MTCO1P21-201ENST00000416634 589 ntBASIC1.45□□□□□ -2.18
CBX1P83916 AC090960.1-201ENST00000421072 306 ntBASIC1.45□□□□□ -2.18
CBX1P83916 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.45□□□□□ -2.18
CBX1P83916 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.45□□□□□ -2.18
CBX1P83916 TPTE2P5-203ENST00000458118 728 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms