Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MIR605-201ENST00000385078 83 ntBASIC0.5□□□□□ -2.33
CCL20P78556 RNA5SP109-201ENST00000391010 116 ntBASIC0.5□□□□□ -2.33
CCL20P78556 RPL21P1-201ENST00000399532 476 ntBASIC0.5□□□□□ -2.33
CCL20P78556 MIR300-201ENST00000401138 83 ntBASIC0.5□□□□□ -2.33
CCL20P78556 RNU2-8P-201ENST00000410727 190 ntBASIC0.5□□□□□ -2.33
CCL20P78556 RNU6-733P-201ENST00000410759 104 ntBASIC0.5□□□□□ -2.33
CCL20P78556 RPS3AP1-201ENST00000413190 320 ntBASIC0.5□□□□□ -2.33
CCL20P78556 AC011233.1-201ENST00000422812 283 ntBASIC0.5□□□□□ -2.33
CCL20P78556 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.5□□□□□ -2.33
CCL20P78556 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.5□□□□□ -2.33
CCL20P78556 AL513124.1-201ENST00000450410 614 ntBASIC0.5□□□□□ -2.33
CCL20P78556 AL133217.1-201ENST00000450980 425 ntBASIC0.5□□□□□ -2.33
CCL20P78556 AC013470.1-201ENST00000453438 462 ntBASIC0.5□□□□□ -2.33
CCL20P78556 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.5□□□□□ -2.33
CCL20P78556 AC092991.1-201ENST00000477176 376 ntBASIC0.5□□□□□ -2.33
CCL20P78556 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.5□□□□□ -2.33
CCL20P78556 AC116562.3-201ENST00000506136 177 ntBASIC0.5□□□□□ -2.33
CCL20P78556 AC068587.5-201ENST00000528506 175 ntBASIC0.5□□□□□ -2.33
CCL20P78556 AL590705.4-201ENST00000532209 134 ntBASIC0.5□□□□□ -2.33
CCL20P78556 AL121579.1-201ENST00000555129 305 ntBASIC0.5□□□□□ -2.33
CCL20P78556 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.5□□□□□ -2.33
CCL20P78556 TPRKBP2-201ENST00000565969 475 ntBASIC0.5□□□□□ -2.33
CCL20P78556 AC091489.2-201ENST00000566263 604 ntBASIC0.5□□□□□ -2.33
CCL20P78556 MIR4753-201ENST00000585119 83 ntBASIC0.5□□□□□ -2.33
CCL20P78556 AC068790.6-201ENST00000602558 258 ntBASIC0.5□□□□□ -2.33
CCL20P78556 AC016727.2-201ENST00000603988 621 ntBASIC0.5□□□□□ -2.33
CCL20P78556 AL157392.4-201ENST00000609756 345 ntBASIC0.5□□□□□ -2.33
CCL20P78556 AC008250.2-201ENST00000615261 205 ntBASIC0.5□□□□□ -2.33
CCL20P78556 AC009509.4-201ENST00000619202 509 ntBASIC0.5□□□□□ -2.33
CCL20P78556 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.49□□□□□ -2.33
CCL20P78556 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CCL20P78556 RNU6-83P-201ENST00000384568 112 ntBASIC0.49□□□□□ -2.33
CCL20P78556 SNORA40.4-201ENST00000390971 128 ntBASIC0.49□□□□□ -2.33
CCL20P78556 RPS29P13-201ENST00000402041 169 ntBASIC0.49□□□□□ -2.33
CCL20P78556 MIR1283-1-201ENST00000408494 87 ntBASIC0.49□□□□□ -2.33
CCL20P78556 Y_RNA.608-201ENST00000410647 95 ntBASIC0.49□□□□□ -2.33
CCL20P78556 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.49□□□□□ -2.33
CCL20P78556 RPS26P5-201ENST00000418544 335 ntBASIC0.49□□□□□ -2.33
CCL20P78556 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.49□□□□□ -2.33
CCL20P78556 MTATP6P16-201ENST00000434543 526 ntBASIC0.49□□□□□ -2.33
CCL20P78556 HMGN2P34-201ENST00000437647 269 ntBASIC0.49□□□□□ -2.33
CCL20P78556 MTCYBP1-201ENST00000454315 1119 ntBASIC0.49□□□□□ -2.33
CCL20P78556 COX6CP14-201ENST00000469580 174 ntBASIC0.49□□□□□ -2.33
CCL20P78556 RAP1BP2-201ENST00000478270 544 ntBASIC0.49□□□□□ -2.33
CCL20P78556 TRBVA-201ENST00000498804 316 ntBASIC0.49□□□□□ -2.33
CCL20P78556 AC091874.1-201ENST00000511402 339 ntBASIC0.49□□□□□ -2.33
CCL20P78556 RNU6-922P-201ENST00000516753 99 ntBASIC0.49□□□□□ -2.33
CCL20P78556 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.49□□□□□ -2.33
CCL20P78556 MIR5695-201ENST00000579717 85 ntBASIC0.49□□□□□ -2.33
CCL20P78556 AC005520.5-201ENST00000613926 164 ntBASIC0.49□□□□□ -2.33
CCL20P78556 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CCL20P78556 RNA5SP361-201ENST00000362686 118 ntBASIC0.48□□□□□ -2.33
CCL20P78556 RNU6-715P-201ENST00000365204 103 ntBASIC0.48□□□□□ -2.33
CCL20P78556 SNORD115-7-201ENST00000365306 82 ntBASIC0.48□□□□□ -2.33
CCL20P78556 RNU6-1031P-201ENST00000384773 107 ntBASIC0.48□□□□□ -2.33
CCL20P78556 MIR92A1-201ENST00000385233 78 ntBASIC0.48□□□□□ -2.33
CCL20P78556 MIR942-201ENST00000401111 86 ntBASIC0.48□□□□□ -2.33
CCL20P78556 RNU6-1054P-201ENST00000411293 104 ntBASIC0.48□□□□□ -2.33
CCL20P78556 AC010154.1-201ENST00000425857 269 ntBASIC0.48□□□□□ -2.33
CCL20P78556 AC004941.2-201ENST00000427009 228 ntBASIC0.48□□□□□ -2.33
CCL20P78556 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
CCL20P78556 snoU13.26-201ENST00000459452 105 ntBASIC0.48□□□□□ -2.33
CCL20P78556 AC105758.1-201ENST00000506038 399 ntBASIC0.48□□□□□ -2.33
CCL20P78556 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.48□□□□□ -2.33
CCL20P78556 SNORD79.1-201ENST00000516069 84 ntBASIC0.48□□□□□ -2.33
CCL20P78556 RNU6-1178P-201ENST00000516674 107 ntBASIC0.48□□□□□ -2.33
CCL20P78556 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.48□□□□□ -2.33
CCL20P78556 AC022616.3-201ENST00000523940 148 ntBASIC0.48□□□□□ -2.33
CCL20P78556 AC022432.1-201ENST00000595739 310 ntBASIC0.48□□□□□ -2.33
CCL20P78556 Z99289.3-201ENST00000605586 594 ntBASIC0.48□□□□□ -2.33
CCL20P78556 AC064807.4-201ENST00000607201 407 ntBASIC0.48□□□□□ -2.33
CCL20P78556 RNU4-5P-201ENST00000607255 135 ntBASIC0.48□□□□□ -2.33
CCL20P78556 AC108706.1-201ENST00000611053 297 ntBASIC0.48□□□□□ -2.33
CCL20P78556 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.48□□□□□ -2.33
CCL20P78556 AL391987.6-201ENST00000305671 199 ntBASIC0.47□□□□□ -2.33
CCL20P78556 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
CCL20P78556 RNU6-562P-201ENST00000362731 107 ntBASIC0.47□□□□□ -2.33
CCL20P78556 RNU5F-6P-201ENST00000362979 116 ntBASIC0.47□□□□□ -2.33
CCL20P78556 Y_RNA.111-201ENST00000363248 100 ntBASIC0.47□□□□□ -2.33
CCL20P78556 RNY1P12-201ENST00000364251 105 ntBASIC0.47□□□□□ -2.33
CCL20P78556 RNA5SP126-201ENST00000365092 109 ntBASIC0.47□□□□□ -2.33
CCL20P78556 RNU6-53P-201ENST00000365367 106 ntBASIC0.47□□□□□ -2.33
CCL20P78556 RNU6-1235P-201ENST00000384559 107 ntBASIC0.47□□□□□ -2.33
CCL20P78556 RNU6-417P-201ENST00000384712 107 ntBASIC0.47□□□□□ -2.33
CCL20P78556 RNU6-550P-201ENST00000391057 101 ntBASIC0.47□□□□□ -2.33
CCL20P78556 RNA5SP323-201ENST00000391094 133 ntBASIC0.47□□□□□ -2.33
CCL20P78556 AC090960.1-201ENST00000421072 306 ntBASIC0.47□□□□□ -2.33
CCL20P78556 AC245047.7-201ENST00000440265 293 ntBASIC0.47□□□□□ -2.33
CCL20P78556 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.47□□□□□ -2.33
CCL20P78556 AC016717.1-201ENST00000448918 286 ntBASIC0.47□□□□□ -2.33
CCL20P78556 AL031274.1-201ENST00000450334 232 ntBASIC0.47□□□□□ -2.33
CCL20P78556 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.47□□□□□ -2.33
CCL20P78556 RNU6-498P-201ENST00000459468 107 ntBASIC0.47□□□□□ -2.33
CCL20P78556 AC008628.2-201ENST00000502605 298 ntBASIC0.47□□□□□ -2.33
CCL20P78556 AK3P2-201ENST00000507976 429 ntBASIC0.47□□□□□ -2.33
CCL20P78556 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.47□□□□□ -2.33
CCL20P78556 RNU6-322P-201ENST00000516010 103 ntBASIC0.47□□□□□ -2.33
CCL20P78556 RNU6-1146P-201ENST00000516282 102 ntBASIC0.47□□□□□ -2.33
CCL20P78556 RNU6-1220P-201ENST00000517126 108 ntBASIC0.47□□□□□ -2.33
CCL20P78556 DEFB131C-201ENST00000528817 165 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms