Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.69□□□□□ -2.3
SKP1P63208 Y_RNA.238-201ENST00000364441 102 ntBASIC0.69□□□□□ -2.3
SKP1P63208 SNORD32A-201ENST00000364805 84 ntBASIC0.69□□□□□ -2.3
SKP1P63208 RNU6-877P-201ENST00000383868 107 ntBASIC0.69□□□□□ -2.3
SKP1P63208 MIR520E-201ENST00000384867 87 ntBASIC0.69□□□□□ -2.3
SKP1P63208 MIR1287-201ENST00000408492 90 ntBASIC0.69□□□□□ -2.3
SKP1P63208 AC114482.1-201ENST00000418010 247 ntBASIC0.69□□□□□ -2.3
SKP1P63208 RPS27AP14-201ENST00000422868 454 ntBASIC0.69□□□□□ -2.3
SKP1P63208 AL133396.1-201ENST00000432048 687 ntBASIC0.69□□□□□ -2.3
SKP1P63208 AC119618.1-201ENST00000434191 222 ntBASIC0.69□□□□□ -2.3
SKP1P63208 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.69□□□□□ -2.3
SKP1P63208 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
SKP1P63208 SNORA31.2-201ENST00000516019 134 ntBASIC0.69□□□□□ -2.3
SKP1P63208 RNA5SP168-201ENST00000516642 112 ntBASIC0.69□□□□□ -2.3
SKP1P63208 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.69□□□□□ -2.3
SKP1P63208 CYP4A27P-201ENST00000567218 190 ntBASIC0.69□□□□□ -2.3
SKP1P63208 MIR151B-201ENST00000584249 96 ntBASIC0.69□□□□□ -2.3
SKP1P63208 AL078603.1-201ENST00000603824 313 ntBASIC0.69□□□□□ -2.3
SKP1P63208 AC008945.2-201ENST00000606056 604 ntBASIC0.69□□□□□ -2.3
SKP1P63208 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.69□□□□□ -2.3
SKP1P63208 MIR6788-201ENST00000618842 66 ntBASIC0.69□□□□□ -2.3
SKP1P63208 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.68□□□□□ -2.3
SKP1P63208 Y_RNA.226-201ENST00000364337 114 ntBASIC0.68□□□□□ -2.3
SKP1P63208 RNU6-17P-201ENST00000384245 107 ntBASIC0.68□□□□□ -2.3
SKP1P63208 RNU6-809P-201ENST00000384461 107 ntBASIC0.68□□□□□ -2.3
SKP1P63208 RNU6-18P-201ENST00000384527 107 ntBASIC0.68□□□□□ -2.3
SKP1P63208 RNU6-910P-201ENST00000390844 107 ntBASIC0.68□□□□□ -2.3
SKP1P63208 RPL21P1-201ENST00000399532 476 ntBASIC0.68□□□□□ -2.3
SKP1P63208 RNU6-1054P-201ENST00000411293 104 ntBASIC0.68□□□□□ -2.3
SKP1P63208 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.68□□□□□ -2.3
SKP1P63208 RPL23AP95-201ENST00000426806 265 ntBASIC0.68□□□□□ -2.3
SKP1P63208 AC016632.1-201ENST00000503994 196 ntBASIC0.68□□□□□ -2.3
SKP1P63208 RN7SKP49-201ENST00000516675 260 ntBASIC0.68□□□□□ -2.3
SKP1P63208 RNU6-467P-201ENST00000517027 110 ntBASIC0.68□□□□□ -2.3
SKP1P63208 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.68□□□□□ -2.3
SKP1P63208 AC133485.1-201ENST00000567176 124 ntBASIC0.68□□□□□ -2.3
SKP1P63208 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
SKP1P63208 TMF1P1-201ENST00000576058 373 ntBASIC0.68□□□□□ -2.3
SKP1P63208 MIR4742-201ENST00000581069 85 ntBASIC0.68□□□□□ -2.3
SKP1P63208 AC016727.2-201ENST00000603988 621 ntBASIC0.68□□□□□ -2.3
SKP1P63208 AC064872.1-201ENST00000604823 1072 ntBASIC0.68□□□□□ -2.3
SKP1P63208 AC009994.1-201ENST00000606889 253 ntBASIC0.68□□□□□ -2.3
SKP1P63208 AC005520.5-201ENST00000613926 164 ntBASIC0.68□□□□□ -2.3
SKP1P63208 AC018630.2-201ENST00000534866 2403 ntBASIC0.68□□□□□ -2.3
SKP1P63208 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SKP1P63208 BX322639.1-202ENST00000423987 2213 ntBASIC0.68□□□□□ -2.3
SKP1P63208 RNU6-336P-201ENST00000364891 107 ntBASIC0.67□□□□□ -2.3
SKP1P63208 RNU6-641P-201ENST00000384006 107 ntBASIC0.67□□□□□ -2.3
SKP1P63208 MIR300-201ENST00000401138 83 ntBASIC0.67□□□□□ -2.3
SKP1P63208 MTCYBP36-201ENST00000404146 440 ntBASIC0.67□□□□□ -2.3
SKP1P63208 AC000111.3-201ENST00000433478 193 ntBASIC0.67□□□□□ -2.3
SKP1P63208 AC013470.1-201ENST00000453438 462 ntBASIC0.67□□□□□ -2.3
SKP1P63208 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.67□□□□□ -2.3
SKP1P63208 SNORD124-201ENST00000459577 104 ntBASIC0.67□□□□□ -2.3
SKP1P63208 RPS29P1-201ENST00000465274 159 ntBASIC0.67□□□□□ -2.3
SKP1P63208 AL163973.1-201ENST00000484753 577 ntBASIC0.67□□□□□ -2.3
SKP1P63208 HMGN1P12-201ENST00000499125 195 ntBASIC0.67□□□□□ -2.3
SKP1P63208 AC090142.3-201ENST00000519012 385 ntBASIC0.67□□□□□ -2.3
SKP1P63208 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.67□□□□□ -2.3
SKP1P63208 AC023050.3-201ENST00000541142 333 ntBASIC0.67□□□□□ -2.3
SKP1P63208 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.67□□□□□ -2.3
SKP1P63208 AC078795.3-201ENST00000602913 472 ntBASIC0.67□□□□□ -2.3
SKP1P63208 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.67□□□□□ -2.3
SKP1P63208 AC019226.2-201ENST00000625973 424 ntBASIC0.67□□□□□ -2.3
SKP1P63208 RNU6-378P-201ENST00000384324 107 ntBASIC0.66□□□□□ -2.3
SKP1P63208 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.66□□□□□ -2.3
SKP1P63208 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.66□□□□□ -2.3
SKP1P63208 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.66□□□□□ -2.3
SKP1P63208 RNA5SP247-201ENST00000411181 105 ntBASIC0.66□□□□□ -2.3
SKP1P63208 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.66□□□□□ -2.3
SKP1P63208 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
SKP1P63208 USP9YP28-201ENST00000435142 589 ntBASIC0.66□□□□□ -2.3
SKP1P63208 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.66□□□□□ -2.3
SKP1P63208 AC010587.1-201ENST00000505809 469 ntBASIC0.66□□□□□ -2.3
SKP1P63208 RNA5SP220-201ENST00000516298 104 ntBASIC0.66□□□□□ -2.3
SKP1P63208 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SKP1P63208 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
SKP1P63208 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.66□□□□□ -2.3
SKP1P63208 AC090517.1-201ENST00000569307 266 ntBASIC0.66□□□□□ -2.3
SKP1P63208 MTATP6P3-201ENST00000581686 676 ntBASIC0.66□□□□□ -2.3
SKP1P63208 AL359999.1-201ENST00000604513 294 ntBASIC0.66□□□□□ -2.3
SKP1P63208 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.66□□□□□ -2.3
SKP1P63208 AL136221.1-201ENST00000621449 509 ntBASIC0.66□□□□□ -2.3
SKP1P63208 AC027514.1-201ENST00000588561 1603 ntBASIC0.66□□□□□ -2.3
SKP1P63208 Y_RNA.324-201ENST00000365165 102 ntBASIC0.65□□□□□ -2.31
SKP1P63208 RPS29P13-201ENST00000402041 169 ntBASIC0.65□□□□□ -2.31
SKP1P63208 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
SKP1P63208 AC002429.1-201ENST00000437672 148 ntBASIC0.65□□□□□ -2.31
SKP1P63208 MTCYBP1-201ENST00000454315 1119 ntBASIC0.65□□□□□ -2.31
SKP1P63208 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.65□□□□□ -2.31
SKP1P63208 AC104136.1-201ENST00000512969 394 ntBASIC0.65□□□□□ -2.31
SKP1P63208 SUMO2P16-201ENST00000519475 264 ntBASIC0.65□□□□□ -2.31
SKP1P63208 AC024995.1-201ENST00000523014 93 ntBASIC0.65□□□□□ -2.31
SKP1P63208 AC025423.5-201ENST00000550230 219 ntBASIC0.65□□□□□ -2.31
SKP1P63208 AL121579.1-201ENST00000555129 305 ntBASIC0.65□□□□□ -2.31
SKP1P63208 Z98751.3-201ENST00000604447 521 ntBASIC0.65□□□□□ -2.31
SKP1P63208 AC105148.1-201ENST00000604961 409 ntBASIC0.65□□□□□ -2.31
SKP1P63208 AC021506.2-201ENST00000612354 169 ntBASIC0.65□□□□□ -2.31
SKP1P63208 RNU6-37P-201ENST00000362692 107 ntBASIC0.64□□□□□ -2.31
SKP1P63208 snoU2-30.2-201ENST00000362805 70 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms