Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RPS6P15-201ENST00000431996 751 ntBASIC1.14□□□□□ -2.23
CLDN18P56856 AL133396.1-201ENST00000432048 687 ntBASIC1.14□□□□□ -2.23
CLDN18P56856 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CLDN18P56856 AC013470.1-201ENST00000453438 462 ntBASIC1.14□□□□□ -2.23
CLDN18P56856 AC079382.1-201ENST00000493346 557 ntBASIC1.14□□□□□ -2.23
CLDN18P56856 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.14□□□□□ -2.23
CLDN18P56856 MTCYBP35-201ENST00000503630 1137 ntBASIC1.14□□□□□ -2.23
CLDN18P56856 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.14□□□□□ -2.23
CLDN18P56856 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.14□□□□□ -2.23
CLDN18P56856 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.14□□□□□ -2.23
CLDN18P56856 AC068338.1-201ENST00000565567 176 ntBASIC1.14□□□□□ -2.23
CLDN18P56856 Z98751.3-201ENST00000604447 521 ntBASIC1.14□□□□□ -2.23
CLDN18P56856 RPL17P51-201ENST00000605218 238 ntBASIC1.14□□□□□ -2.23
CLDN18P56856 AC092354.1-201ENST00000606057 376 ntBASIC1.14□□□□□ -2.23
CLDN18P56856 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.14□□□□□ -2.23
CLDN18P56856 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CLDN18P56856 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CLDN18P56856 RNU6-1097P-201ENST00000363586 107 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 RNU6-74P-201ENST00000384235 107 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 RPS29P13-201ENST00000402041 169 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.13□□□□□ -2.23
CLDN18P56856 COX6CP10-201ENST00000416832 224 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.13□□□□□ -2.23
CLDN18P56856 RPL31P35-201ENST00000431058 377 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 AC245047.4-201ENST00000433189 144 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 SNAP23P1-201ENST00000433229 246 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.13□□□□□ -2.23
CLDN18P56856 AC069257.2-201ENST00000441819 155 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 AL022238.1-201ENST00000442557 355 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 AC132479.1-201ENST00000449160 144 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 AC016925.1-201ENST00000458303 298 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 RPL30P7-201ENST00000479312 323 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 AC108078.1-201ENST00000508073 725 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 AC005178.1-201ENST00000508392 440 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 RNU7-40P-201ENST00000516397 64 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.13□□□□□ -2.23
CLDN18P56856 MTND2P32-201ENST00000521584 1038 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 AC090115.3-201ENST00000553218 849 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.13□□□□□ -2.23
CLDN18P56856 AC109446.2-201ENST00000567872 497 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 MIR4781-201ENST00000585250 76 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 AC002044.1-201ENST00000606707 158 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 uc_338.11-201ENST00000619132 160 ntBASIC1.13□□□□□ -2.23
CLDN18P56856 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
CLDN18P56856 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.12□□□□□ -2.23
CLDN18P56856 SNORA40.3-201ENST00000390964 122 ntBASIC1.12□□□□□ -2.23
CLDN18P56856 AP000275.1-201ENST00000411943 390 ntBASIC1.12□□□□□ -2.23
CLDN18P56856 MTCO1P21-201ENST00000416634 589 ntBASIC1.12□□□□□ -2.23
CLDN18P56856 AL117339.3-201ENST00000418733 162 ntBASIC1.12□□□□□ -2.23
CLDN18P56856 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.12□□□□□ -2.23
CLDN18P56856 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.12□□□□□ -2.23
CLDN18P56856 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.12□□□□□ -2.23
CLDN18P56856 AC010531.2-201ENST00000465012 153 ntBASIC1.12□□□□□ -2.23
CLDN18P56856 RPS26P45-201ENST00000471748 340 ntBASIC1.12□□□□□ -2.23
CLDN18P56856 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.12□□□□□ -2.23
CLDN18P56856 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.12□□□□□ -2.23
CLDN18P56856 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.12□□□□□ -2.23
CLDN18P56856 AC069113.1-201ENST00000517763 267 ntBASIC1.12□□□□□ -2.23
CLDN18P56856 AC012414.6-201ENST00000568241 401 ntBASIC1.12□□□□□ -2.23
CLDN18P56856 AC090616.2-202ENST00000584248 222 ntBASIC1.12□□□□□ -2.23
CLDN18P56856 AC073413.2-201ENST00000604332 360 ntBASIC1.12□□□□□ -2.23
CLDN18P56856 AC006566.1-201ENST00000608943 513 ntBASIC1.12□□□□□ -2.23
CLDN18P56856 MIR8065-201ENST00000620577 100 ntBASIC1.12□□□□□ -2.23
CLDN18P56856 Y_RNA.164-201ENST00000363709 102 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 RNU6-108P-201ENST00000365558 107 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 SNORA36A-201ENST00000384221 132 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 SNORA26.3-201ENST00000391119 136 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 RNU6-1093P-201ENST00000391194 107 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 SNX2P2-201ENST00000424553 323 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 USP9YP28-201ENST00000435142 589 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.11□□□□□ -2.23
CLDN18P56856 OR2AQ1P-201ENST00000451972 200 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 AL033528.1-201ENST00000453780 140 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.11□□□□□ -2.23
CLDN18P56856 snoU13.27-201ENST00000459278 104 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 HMGN2P9-201ENST00000476875 229 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.11□□□□□ -2.23
CLDN18P56856 AC008628.2-201ENST00000502605 298 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 AC091435.1-201ENST00000505442 584 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 RNU2-69P-201ENST00000516061 100 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 AC106038.2-201ENST00000520706 568 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.11□□□□□ -2.23
CLDN18P56856 CYP3A52P-201ENST00000563326 91 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.11□□□□□ -2.23
CLDN18P56856 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.11□□□□□ -2.23
CLDN18P56856 MIR6078-201ENST00000611069 100 ntBASIC1.11□□□□□ -2.23
CLDN18P56856 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
CLDN18P56856 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.1□□□□□ -2.23
CLDN18P56856 RNA5SP327-201ENST00000362494 101 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 RNU6-545P-201ENST00000362681 104 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 RNU6-53P-201ENST00000365367 106 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 RNU6-418P-201ENST00000384035 107 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 RNU6-456P-201ENST00000384493 107 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 RNU6-1106P-201ENST00000390845 107 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 RPL37P10-201ENST00000412884 288 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 AC090960.1-201ENST00000421072 306 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 AC010099.3-201ENST00000423896 409 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 CST2P1-201ENST00000425770 87 ntBASIC1.1□□□□□ -2.23
CLDN18P56856 RPL23AP95-201ENST00000426806 265 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms