Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.62□□□□□ -1.99
HDAC4P56524 ELOCP24-201ENST00000456370 334 ntBASIC2.62□□□□□ -1.99
HDAC4P56524 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.62□□□□□ -1.99
HDAC4P56524 RNU6-120P-201ENST00000516077 103 ntBASIC2.62□□□□□ -1.99
HDAC4P56524 RNA5SP320-201ENST00000516263 124 ntBASIC2.62□□□□□ -1.99
HDAC4P56524 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.62□□□□□ -1.99
HDAC4P56524 AC018889.1-201ENST00000605372 397 ntBASIC2.62□□□□□ -1.99
HDAC4P56524 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HDAC4P56524 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.62□□□□□ -1.99
HDAC4P56524 AC073544.1-201ENST00000600110 1595 ntBASIC2.61□□□□□ -1.99
HDAC4P56524 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HDAC4P56524 Y_RNA.315-201ENST00000365117 102 ntBASIC2.61□□□□□ -1.99
HDAC4P56524 MIR518C-201ENST00000384822 101 ntBASIC2.61□□□□□ -1.99
HDAC4P56524 MIR27B-201ENST00000385129 97 ntBASIC2.61□□□□□ -1.99
HDAC4P56524 MTCYBP4-201ENST00000401524 249 ntBASIC2.61□□□□□ -1.99
HDAC4P56524 AC243428.1-201ENST00000421099 264 ntBASIC2.61□□□□□ -1.99
HDAC4P56524 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.61□□□□□ -1.99
HDAC4P56524 snoU13.14-201ENST00000459372 104 ntBASIC2.61□□□□□ -1.99
HDAC4P56524 SNRPGP7-201ENST00000469016 106 ntBASIC2.61□□□□□ -1.99
HDAC4P56524 AC097473.1-201ENST00000508142 408 ntBASIC2.61□□□□□ -1.99
HDAC4P56524 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.61□□□□□ -1.99
HDAC4P56524 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.61□□□□□ -1.99
HDAC4P56524 AC115990.1-201ENST00000526957 301 ntBASIC2.61□□□□□ -1.99
HDAC4P56524 AC027176.1-201ENST00000560204 514 ntBASIC2.61□□□□□ -1.99
HDAC4P56524 AC007336.1-201ENST00000576365 3828 ntBASIC2.61□□□□□ -1.99
HDAC4P56524 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.61□□□□□ -1.99
HDAC4P56524 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.61□□□□□ -1.99
HDAC4P56524 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HDAC4P56524 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HDAC4P56524 Y_RNA.48-201ENST00000362710 103 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 RNU6-655P-201ENST00000362858 107 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 RNU1-72P-201ENST00000362976 153 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 Y_RNA.123-201ENST00000363338 102 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 RNA5SP68-201ENST00000363885 119 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 RNA5SP456-201ENST00000364002 114 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 Y_RNA.533-201ENST00000384596 114 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 Y_RNA.579-201ENST00000390939 94 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 AL591034.2-201ENST00000402839 359 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 EIF4EP4-201ENST00000424916 578 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 AIMP1P2-201ENST00000425294 312 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.6□□□□□ -1.99
HDAC4P56524 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.6□□□□□ -1.99
HDAC4P56524 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.6□□□□□ -1.99
HDAC4P56524 UBE2V1P7-201ENST00000446395 340 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.6□□□□□ -1.99
HDAC4P56524 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.6□□□□□ -1.99
HDAC4P56524 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.6□□□□□ -1.99
HDAC4P56524 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.6□□□□□ -1.99
HDAC4P56524 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.6□□□□□ -1.99
HDAC4P56524 RNU1-41P-201ENST00000516161 162 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 RNU1-48P-201ENST00000516400 162 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 SCARNA16.2-201ENST00000516520 172 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 CBX3P8-201ENST00000532412 525 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 MRPS36P4-201ENST00000534436 298 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 MIR5696-201ENST00000578474 85 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.6□□□□□ -1.99
HDAC4P56524 AC009318.2-201ENST00000610917 651 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.6□□□□□ -1.99
HDAC4P56524 AC126177.8-201ENST00000618339 1015 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HDAC4P56524 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.6□□□□□ -1.99
HDAC4P56524 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HDAC4P56524 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.6□□□□□ -1.99
HDAC4P56524 AC009541.1-201ENST00000438279 2662 ntBASIC2.6□□□□□ -1.99
HDAC4P56524 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HDAC4P56524 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HDAC4P56524 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
HDAC4P56524 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.59□□□□□ -1.99
HDAC4P56524 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
HDAC4P56524 RNU6-1210P-201ENST00000363775 107 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 RNU6-890P-201ENST00000384121 107 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 RN7SKP61-201ENST00000410642 295 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 AC008267.5-201ENST00000424928 265 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 USMG5P1-201ENST00000425964 177 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.59□□□□□ -1.99
HDAC4P56524 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.59□□□□□ -1.99
HDAC4P56524 Y_RNA.653-201ENST00000459091 95 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 CKS1BP2-201ENST00000497342 240 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 AC107222.1-201ENST00000510899 637 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 ACA59.1-201ENST00000515966 143 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 RNU2-53P-201ENST00000516257 147 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.59□□□□□ -1.99
HDAC4P56524 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HDAC4P56524 HSPE1P4-201ENST00000550617 308 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 MIR5690-201ENST00000583739 73 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 AC005014.2-201ENST00000607795 599 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 AL137847.3-201ENST00000611521 109 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 MIR6817-201ENST00000615588 66 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 AL160413.1-201ENST00000622780 310 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 AP000560.1-201ENST00000624150 1937 ntBASIC2.59□□□□□ -1.99
HDAC4P56524 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HDAC4P56524 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HDAC4P56524 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.58□□□□□ -2
HDAC4P56524 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.58□□□□□ -2
HDAC4P56524 Y_RNA.2-201ENST00000362330 96 ntBASIC2.58□□□□□ -2
HDAC4P56524 Y_RNA.11-201ENST00000362375 109 ntBASIC2.58□□□□□ -2
HDAC4P56524 U3.13-201ENST00000364804 214 ntBASIC2.58□□□□□ -2
HDAC4P56524 SNORA36A-201ENST00000384221 132 ntBASIC2.58□□□□□ -2
HDAC4P56524 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms