Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 Y_RNA.83-201ENST00000363005 113 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 Y_RNA.274-201ENST00000364714 101 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 Y_RNA.418-201ENST00000384029 102 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 RNU4-70P-201ENST00000384579 139 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 RNA5SP171-201ENST00000391071 115 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 MIR548I3-201ENST00000408378 149 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 MIR548I1-201ENST00000408810 149 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 Y_RNA.590-201ENST00000410140 107 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 RNU2-54P-201ENST00000410299 190 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.3□□□□□ -1.88
GFRA1P56159 PIGPP3-201ENST00000425307 415 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.3□□□□□ -1.88
GFRA1P56159 SNORD105B-201ENST00000458770 79 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 RPL7P49-201ENST00000471402 708 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 RPL31P41-201ENST00000477967 372 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 AC106707.2-201ENST00000484182 374 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 AC140059.1-201ENST00000489238 361 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 AC104619.4-201ENST00000510773 249 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 Y_RNA.679-201ENST00000516416 91 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.3□□□□□ -1.88
GFRA1P56159 AC008011.1-201ENST00000545989 227 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.3□□□□□ -1.88
GFRA1P56159 MIR8058-201ENST00000615737 89 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 MIR6075-201ENST00000620782 95 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.3□□□□□ -1.88
GFRA1P56159 AC009093.8-201ENST00000641769 292 ntBASIC3.3□□□□□ -1.88
GFRA1P56159 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
GFRA1P56159 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
GFRA1P56159 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
GFRA1P56159 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GFRA1P56159 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
GFRA1P56159 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
GFRA1P56159 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GFRA1P56159 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
GFRA1P56159 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
GFRA1P56159 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
GFRA1P56159 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.29□□□□□ -1.88
GFRA1P56159 UBE2WP1-201ENST00000362030 340 ntBASIC3.29□□□□□ -1.88
GFRA1P56159 Y_RNA.199-201ENST00000364014 102 ntBASIC3.29□□□□□ -1.88
GFRA1P56159 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.29□□□□□ -1.88
GFRA1P56159 MIR670-201ENST00000390142 98 ntBASIC3.29□□□□□ -1.88
GFRA1P56159 Z98941.1-201ENST00000407764 100 ntBASIC3.29□□□□□ -1.88
GFRA1P56159 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.29□□□□□ -1.88
GFRA1P56159 SNORA27.4-201ENST00000516650 95 ntBASIC3.29□□□□□ -1.88
GFRA1P56159 RNA5SP143-201ENST00000516936 115 ntBASIC3.29□□□□□ -1.88
GFRA1P56159 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.29□□□□□ -1.88
GFRA1P56159 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.29□□□□□ -1.88
GFRA1P56159 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.29□□□□□ -1.88
GFRA1P56159 MIR4644-201ENST00000579929 84 ntBASIC3.29□□□□□ -1.88
GFRA1P56159 MIR92B-201ENST00000607575 96 ntBASIC3.29□□□□□ -1.88
GFRA1P56159 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.29□□□□□ -1.88
GFRA1P56159 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.29□□□□□ -1.88
GFRA1P56159 AC092628.2-201ENST00000622492 339 ntBASIC3.29□□□□□ -1.88
GFRA1P56159 MAPK10-373ENST00000641983 6772 ntBASIC3.29□□□□□ -1.88
GFRA1P56159 TNPO1P3-201ENST00000436471 2662 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
GFRA1P56159 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
GFRA1P56159 MIR423-201ENST00000362201 94 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 SNORD9-201ENST00000362566 104 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 SNORA71.3-201ENST00000362582 128 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 RNA5SP119-201ENST00000362715 117 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 SNORD87-201ENST00000364849 89 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 RNU2-61P-201ENST00000411069 191 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 CYCSP4-201ENST00000429682 331 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 NDUFB1P1-201ENST00000435191 180 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 PRELID3BP1-201ENST00000457142 540 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.28□□□□□ -1.88
GFRA1P56159 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.28□□□□□ -1.88
GFRA1P56159 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
GFRA1P56159 AP002001.1-203ENST00000534002 267 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.28□□□□□ -1.88
GFRA1P56159 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.28□□□□□ -1.88
GFRA1P56159 RPL21P9-201ENST00000556149 474 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 AC074050.1-201ENST00000563247 211 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 AC008739.3-201ENST00000603262 127 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
GFRA1P56159 MFSD8-236ENST00000641509 4050 ntBASIC3.28□□□□□ -1.88
GFRA1P56159 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
GFRA1P56159 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.28□□□□□ -1.88
GFRA1P56159 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
GFRA1P56159 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.28□□□□□ -1.89
GFRA1P56159 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.27□□□□□ -1.89
GFRA1P56159 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.27□□□□□ -1.89
GFRA1P56159 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
GFRA1P56159 Y_RNA.76-201ENST00000362931 109 ntBASIC3.27□□□□□ -1.89
GFRA1P56159 SNORD32B-201ENST00000364460 84 ntBASIC3.27□□□□□ -1.89
GFRA1P56159 Y_RNA.597-201ENST00000410463 100 ntBASIC3.27□□□□□ -1.89
GFRA1P56159 AC009963.1-201ENST00000417265 157 ntBASIC3.27□□□□□ -1.89
GFRA1P56159 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.27□□□□□ -1.89
GFRA1P56159 YME1L1P1-201ENST00000429435 297 ntBASIC3.27□□□□□ -1.89
GFRA1P56159 TOMM22P2-201ENST00000430735 237 ntBASIC3.27□□□□□ -1.89
GFRA1P56159 RPL27AP5-201ENST00000469428 449 ntBASIC3.27□□□□□ -1.89
GFRA1P56159 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.27□□□□□ -1.89
GFRA1P56159 SEM1P1-201ENST00000506694 209 ntBASIC3.27□□□□□ -1.89
GFRA1P56159 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.27□□□□□ -1.89
GFRA1P56159 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.27□□□□□ -1.89
GFRA1P56159 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
GFRA1P56159 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
GFRA1P56159 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.27□□□□□ -1.89
GFRA1P56159 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 396.2 ms